Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00801 ATGGTCCGTCGGGTCGACAAGCACAAAGGTTACAGAGACCTCAGCAAACGCAGGGTCCATGAAGAGTGGTACCACAAGGGCAAGCTCGTTAACTCCATCATGCGCCACGTGGCAGAGACCTTGAACATCGATTTTCAAGAGTTGTACATTCACATTGAACGGCCTTTATATCGTAAATATGTTCACGCTTTTGAGGCATTTAAAATAATTGTGACTGATCCTGATTCTGTTTTGGATTCTCTCACACGTAAAGTTAAGGAGGTTAGCCCTGATGGGAAGAAGGTTTTCAAGGTTGTTCCGGCAGTTTCAGAAGAAGTGAAGGATTGTCTAGTAAAGAATATTAGAAGACGGATGACCCCACAACCCTTGAAAATTAGGGCAGATATTGAAATGGAATGTTTTCAATTTGATGGAGTTCTTCACATTAAGGAGGCAATGCGGAGAGCTGAAGCTGCTGGAAATAATGACTGCCCTGTGAAAATTAAAATTGTTGCTCCCCCACTTTATGTTCTTACCACTCAGACTCTTGACAAGGAACAAGGAATACTTGTCCTCAACAACGCTATTGCTGCATGCACTGCATCGATAGAACAACACAAGGGTAAACTTGTTGTGAAGGAGGCACCAAGAGCTGTGAGTGAACGTGATGATAAATTGCTTGCGGAGCACATTGCTAAGCTACGCGAAGACAACTAG 696 0.4353 MVRRVDKHKGYRDLSKRRVHEEWYHKGKLVNSIMRHVAETLNIDFQELYIHIERPLYRKYVHAFEAFKIIVTDPDSVLDSLTRKVKEVSPDGKKVFKVVPAVSEEVKDCLVKNIRRRMTPQPLKIRADIEMECFQFDGVLHIKEAMRRAEAAGNNDCPVKIKIVAPPLYVLTTQTLDKEQGILVLNNAIAACTASIEQHKGKLVVKEAPRAVSERDDKLLAEHIAKLREDN* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00801 231 Gene3D Translation initiation factor 2; subunit 1; domain 2 16 91 IPR024054 -
Rops9g00801 231 Gene3D EIF_2_alpha 123 231 IPR024055 -
Rops9g00801 231 SUPERFAMILY eIF2alpha middle domain-like 17 121 IPR024054 -
Rops9g00801 231 FunFam Eukaryotic translation initiation factor 2 subunit alpha 15 117 - -
Rops9g00801 231 SUPERFAMILY eIF-2-alpha, C-terminal domain 121 231 IPR024055 -
Rops9g00801 231 Pfam Eukaryotic translation initiation factor 2 alpha subunit 48 178 IPR011488 GO:0003723|GO:0003743
Rops9g00801 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 231 IPR011488 GO:0003723|GO:0003743
Rops9g00801 231 FunFam Eukaryotic translation initiation factor 2 subunit 1 123 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00801 Rops-Chr9 12456057 12459407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00801 1 231 Eukaryotic Initiation Factors Gene Family AT5G05470 71.429 2.99e-121 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00801 K03237 - gmx:100805950 383.645