Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00785 ATGGGCCACAATTGGACCTTCAAGCCATCACTTCTTTTTGGTCCTGCTGTTTTTCTTTTTGGTATTGATGACTGCAGAAATGGGATGGACCTACGTTGCAGAGAAGAAGAACTAGCCGTTGGGACTTTGGGGTGCGGACAGATTTTGCAACTGGGGTTGAGAAATGCAGCACCTTTGCATCATATCTACCTCAACCCACGACATTTTTTCAGGTTGTTTTTCTGCTGCTTCTTCTGGGTCCACTGTTTGTGGTTTCTTCTGCTCCCAGTGAAGCCCGTGTCAGGCGAAGAGCGTTGGGATGGAGTTATTGTGACACAGTCAAACTTCTTAGCACTTCAAGCATTCAAGCAAGAGTTGGTTGATCCCAAAGGCTTCTTGAGAAGCTGGAATGACAGCGGCTATGGAACTTGTTCTGGAGCTTGGGTTGGTATTAAGTGTGCTCAGGGACAGGTTATTGTAATCCAGCTTCCATGGAAAGGGTTGCAGGGTCGCATCACTGAGAGGATTGGCCAACTTCAGGGGCTTAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCATCATTGGGACTTCTCCTCAATCTAAGAGGGGTTCAACTGTTCAACAATCGGTTCACAGGGTCTATCCCTCCTTCATTAGGTTCTTGTCCTTTGCTTCAGTCTTTAGACCTTAGTAACAATTTGCTCACAGGGAGAATCCCTGATACCCTTGGCAATTCCACTAAGCTTTATTGGCTTAACTTGAGCTTCAATTCCTTCTCAGGTCCAATACCAACTAGCCTAACTCGCTTAGCTTCTCTCACCTTCATATCTCTTCAACACAATAACCTCTCAGGCTCTATTCCTAATTCATGGGGTGGTAGCTTGAAGAATGGCTTCTTTCGGCTTCAGAATCTGATCCTTGATCATAACTTCTTTACTGGAAGCATTCCTGCTTCTTTGGGCAGCTTAAGTGAACTCACAGAGGCTTCTCTTAGTCATAACCAGTTGAGTGGAGCTATACCAAATGACATAGGAAGCCTTTCTAGGATTAAGACAGTAGATTTTTCTAATAATGCCTTGAATGGAAGCTTACCTGCCACTCTCTCTAATTTATCCTCACTCAATCTGTTGAATGTAGAGAACAACCACCTTGGCAATCAAATCCCAGAAGCTTTAGGCAGATTGCATAATCTTTCTGTTCTGGTTTTGGGCAGAAACCAATTTAGTGGCCACATTCCTCAAAGTATTGGAAACATTTCAAAGCTTACACAGATTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGTCTCCTTTGGCAATCTAAGTAGACTTAGTTTCTTCAATGTTTCTCATAATAACCTCTCTGGTCCAGTTCCAACACTACTTGCTCAGAAGTTCAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTACAGCCCTTCAACCCCATGTCCCTCTCCAGCTCCTTCTGAAGGACAAGGAGTCCTTGGTGCACCTCCTGAAATATCAAAACACCACCATCACAAGAAACTAGGTACCAAAGACATAATTCTCATCGTAGCAGGAGTGCTCCTTGTAGTCCTGATAACAATCTGCTGCATCCTGCTCTTATGCCTGATCAGAAAAAGAACAACATCAAATGCAGAGGGAGGCCAGGCCACAGGTAGAGCAGCTGCTACCAGGACAGAAAAAGGAGTCCCTCCAGTTGCCGGTGAAGCTGAAGCGGGTGGTGAGAATGGAGGTAAACTAGTCCATTTTGATGGACCACTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCGGAAATAATGGGAAAGAGCACCTATGGAACTGTGTACAAGGCCACATTAGAGGATGGAAGTCAAGCTGCAGTAAAAAGATTGAGGGAAAAGATCACTAAAGGTCAGAAAGAATTTGAATCCGAAGTTAGTGTTCTCGGGAGAATTAGACACCCAAATCTTTTGGCACTAAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTTTCCTACATGCTCGTGGATCTGAAACGGCTATTGATTGGCCAACAAGGATGAATATAGCACAGGGCATGGCTCGTGGCTTGTTTCACCTTCATTCCCAGGAGAACATTATACATGGGAACCTTACATCCAGCAATGTTTTGCTTGATGAGAACACAAATGCTAAAATAGCTGATTTTGGTCTTTCTCGTTTGATGACAACTGCTGCTAATTCTAACGTGATTGCTACTGCTGGAGCATTGGGATATCGAGCACCTGAGCTCTCAAAGCTCAAGAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGTGTAGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACTAATGAGGTTTTTGATGTTGAGTTGATGAGAGATGCATCAACAAATGGCGATGAGTTGCTAAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTCCTTCAGCAGCTAGAAGAGATTAGACCACCAGGGATATCAGCCATTTCTGGTGATGAAGGAACCATCCCTTCCACCAGTGAATAA 2679 0.4401 MGHNWTFKPSLLFGPAVFLFGIDDCRNGMDLRCREEELAVGTLGCGQILQLGLRNAAPLHHIYLNPRHFFRLFFCCFFWVHCLWFLLLPVKPVSGEERWDGVIVTQSNFLALQAFKQELVDPKGFLRSWNDSGYGTCSGAWVGIKCAQGQVIVIQLPWKGLQGRITERIGQLQGLRKLSLHDNQIGGSIPSSLGLLLNLRGVQLFNNRFTGSIPPSLGSCPLLQSLDLSNNLLTGRIPDTLGNSTKLYWLNLSFNSFSGPIPTSLTRLASLTFISLQHNNLSGSIPNSWGGSLKNGFFRLQNLILDHNFFTGSIPASLGSLSELTEASLSHNQLSGAIPNDIGSLSRIKTVDFSNNALNGSLPATLSNLSSLNLLNVENNHLGNQIPEALGRLHNLSVLVLGRNQFSGHIPQSIGNISKLTQIDLSLNNLSGEIPVSFGNLSRLSFFNVSHNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTPCPSPAPSEGQGVLGAPPEISKHHHHKKLGTKDIILIVAGVLLVVLITICCILLLCLIRKRTTSNAEGGQATGRAAATRTEKGVPPVAGEAEAGGENGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQKEFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGSETAIDWPTRMNIAQGMARGLFHLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTNGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPPGISAISGDEGTIPSTSE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00785 892 Gene3D Transferase(Phosphotransferase) domain 1 679 877 - -
Rops9g00785 892 SUPERFAMILY L domain-like 142 480 - -
Rops9g00785 892 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 299 872 - -
Rops9g00785 892 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 219 292 - -
Rops9g00785 892 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 293 490 - -
Rops9g00785 892 FunFam Pollen receptor-like kinase 1 678 880 - -
Rops9g00785 892 ProSiteProfiles Protein kinase domain profile. 601 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00785 892 FunFam Leucine-rich repeat receptor-like protein kinase 586 677 - -
Rops9g00785 892 Pfam Leucine rich repeat N-terminal domain 110 146 IPR013210 -
Rops9g00785 892 Gene3D Ribonuclease Inhibitor 294 493 IPR032675 -
Rops9g00785 892 SMART LRR_typ_2 321 345 IPR003591 -
Rops9g00785 892 SMART LRR_typ_2 220 244 IPR003591 -
Rops9g00785 892 SMART LRR_typ_2 268 291 IPR003591 -
Rops9g00785 892 SMART LRR_typ_2 369 393 IPR003591 -
Rops9g00785 892 SMART LRR_typ_2 172 196 IPR003591 -
Rops9g00785 892 Gene3D Ribonuclease Inhibitor 220 293 IPR032675 -
Rops9g00785 892 Gene3D Ribonuclease Inhibitor 108 219 IPR032675 -
Rops9g00785 892 Pfam Protein tyrosine and serine/threonine kinase 604 869 IPR001245 GO:0004672|GO:0006468
Rops9g00785 892 SUPERFAMILY Protein kinase-like (PK-like) 605 873 IPR011009 -
Rops9g00785 892 CDD STKc_IRAK 607 872 - -
Rops9g00785 892 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Rops9g00785 892 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
Rops9g00785 892 Gene3D Phosphorylase Kinase; domain 1 607 678 - -
Rops9g00785 892 FunFam Leucine-rich repeat receptor-like kinase 107 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00785 Rops-Chr9 12269080 12273845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00785 59 874 Receptor kinase-like Gene Family AT3G51740 62.576 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops9g00785 PK_Tyr_Ser-Thr 5.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00785 - - gmx:100811174 1328.15