Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00773 ATGTCCAACATCACCCAAGCTGTTGCCCCTCTCCTTCCGGCACCGGACTGCGAGCACTCCCCTGAAGACCCGAATCCGCAAAACGGGTCAATTACCGGAGCAGTGTTCAATGTCTCAACAACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCGACCATGAAAGTGTTGGGCATAATTCCGGGGTTCGTGGTGATTGTGTTGGTGGCACTGATAACAGATATAACGGTGGAGTTTATGTTGAGGTACACAAGTTCAGGAAAATCCACTACCTATGCGGGTATGGTGGGTGAGTCATTTGGTTTCCTAGGATCCCTCGCTGTCAAGATTTGTGTCATCACAACCAATCTTGGTATCCTCATCATCTATTTCATTATTCTTGGAGACGTGCTTTGTGGAAATGAGTCCAAAGGAACCACACACTTGGGTGTTCTACAAGAATGGTTTGGTGTCCACTGGTGGACCTCTCGAGCTTTTGCTCTTCTCATAGTTGCTTTCTTTATAATGCTTCCATTGGTTATGTTACGGCGTGTTGATTCACTCAGATATAGCTCTGCAATATCAATCCTACTAGCATTGGTCTTTGTTGCAATATGCTCAGCAATGGCGTTTATTGCATTATGGTCTGGCAAAACTCAATCACTGAGGATACTACCTGATTTCTCTCAAGTCACTGCCTTTGACCTTTTCACCACTGTCCCAGTGTTTGTGACGGGTTTCGGATTCCATGTCAATGTTCATCCAATTAGAGCAGAGCTTGGAAAACCTGCAGACATGAGTTTGGCTACACGGATTTCATTGATAATCTGTGTGGCCATTTACTTTGCTATTGGCTTCTTTGGTTACCTGTTGTTTGGTGATTCCATCATGCCTGATGTGTTGGTAAACTTTGACCAAAACTCCAATTCAAGTGCTGGTAGATTGCTCAATGACATTGTTCGGTTAAGCTATGCACTCCATCTTGCACTTGTGTTCCCCATCATGAACTATTCCTTAAGGGCCAATATAGATGAACTAATATTCTCTAAGAAAGATAAACGTCCCCTGGCATTAGACACCCCAAGATTTGTGTCACTAACTCTTGCTTTGCTAGTACTCACATACTTGGTAGCTGTGGCTATCCCAAACATTTGGTATTTTTTTCAGTTCTTGGGATCAACAACCATTGTTTGCCTCTCATTTATCTTCCCTGCTGCAATCATTCTAAGGGATGTGTGCGGCATATCAACAGTGAAAGATCGAGTCATGGCAATAGTGGTGATTGTTTTGGCTGTAGGGACAAGCGGAATTGCTATATGGACCAACTTATATGGTTCCAGTGCTGACCAACCATAA 1335 0.4412 MSNITQAVAPLLPAPDCEHSPEDPNPQNGSITGAVFNVSTTMIGAGIMSVPATMKVLGIIPGFVVIVLVALITDITVEFMLRYTSSGKSTTYAGMVGESFGFLGSLAVKICVITTNLGILIIYFIILGDVLCGNESKGTTHLGVLQEWFGVHWWTSRAFALLIVAFFIMLPLVMLRRVDSLRYSSAISILLALVFVAICSAMAFIALWSGKTQSLRILPDFSQVTAFDLFTTVPVFVTGFGFHVNVHPIRAELGKPADMSLATRISLIICVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSNSSAGRLLNDIVRLSYALHLALVFPIMNYSLRANIDELIFSKKDKRPLALDTPRFVSLTLALLVLTYLVAVAIPNIWYFFQFLGSTTIVCLSFIFPAAIILRDVCGISTVKDRVMAIVVIVLAVGTSGIAIWTNLYGSSADQP* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00773 444 PANTHER AMINO ACID TRANSPORTER 22 423 - -
Rops9g00773 444 Pfam Transmembrane amino acid transporter protein 28 403 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00773 Rops-Chr9 12202379 12206913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00773 6 442 Amino Acid or Auxin Permease AAAP Family AT3G56200 55.023 1.12e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00773 - - gmx:100794031 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00773 9 12202379 12206913 Rops9g00773 9 12202379 12206913 ECH
Rops11g03893 11 72906641 72908818 Rops9g00773 9 12202379 12206913 PCT