Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00772 ATGTCGCCGGTGACCGGAGCACACGTTCCTCTCTTGCCGGGATCCAAGGCTGCGGTGGAGCCGGCAACCGTTTCCGGCGCAGTGTTCAATGTCGCCACGAGCATTATTGGCGCCGGAATTATGTCTCTTCCGGCGACTATGAAGGTTCTGGGTGTGATTCCGGCGTTGGTGTTAGTTCTGTTCATCGCTTTTCTTGCTGAAATATCGGTTGATTTCCTTATGAGGTTTACGCATTCCGGTGAAACGACGACGTATGCTGGTGTCATGAGAGAAGCTTTTGGACCCTTAGGAGCATTTGCAGCTCAACTCTGTGTTGTAATTACTAATCTTGGGTGTTTAATTATGTACTTAATAATTATTGCGGATGTACTTTCTGGAAATCAACCTGAAGGGGAAGTTCATTTGGGTATTTTGCAACAGTGGTTTGGAATTCAGTGGTGGAATTCACGGGAATTTGCCCTGCTCGTCACCTTAGTCTTGGTTTTGCTTCCATTGGTCTTGTACCGTCGTGTAGAGTCCTTGAAGTTCAGTTCAGCAATATCAACCCTTCTTGCCGTGGTATTTGTTACAATATGTACCGCGTTGGCAATCATTGCTCTTGTGGAAGGAAAAACACAAACCCCTAGATTGTTTCCTCGTTTGGATCACCAGACCTCTTTCTTTGATCTGTTTACTGCAGTTCCAGTTATAGTCACAGCCTATACATTTCATTTCAATGTACATCCAATTGGGTTTGAACTTGCCAAGCCATCAGATATGACAACAGCAGTTCGAATAGCGTTATTACTTTGTGCTGTTATATACTTTTCCATAGGCCTATTTGGGTACCTCTTGTTTGGTGATTCAACTCAATCTGATATTCTTGTCAATTTTGACCAGAATGCTGATTCTGCAGTTGGTTCCTTGCTCAATACTTTGGTCCGTTTAAGCTATGCATTTCATGTTATGCTGGCTTTCCCTCTCTTGAACTTCTCTTTGAGAGCCAACATAGATGAATTCTTCTTCCCAAAGAAGCCTCTACTAGCCACAGACAGCAAGAGATTTGTGAGCCTCACTCTAATTTTGCTAATCTTCAGCTTTGTTGCTGCTATAGTAGTGCCAGATATTTGGTACATCTTTCAGTTTATGGGATCAACATCTGCAGTGTGCCTTGCCTTTGTCTTCCCTGGCTCTATAGTTCTAAGGGATTCTCACGGTATATCAACAAGAAGGGACAAAATTATAGCACTGGTTATGGTGATACTAGCTGTAGTAACAAGTGTGATTGCTATCTCCACCAACATATCCAAGTTTTTTCTGTAG 1302 0.4316 MSPVTGAHVPLLPGSKAAVEPATVSGAVFNVATSIIGAGIMSLPATMKVLGVIPALVLVLFIAFLAEISVDFLMRFTHSGETTTYAGVMREAFGPLGAFAAQLCVVITNLGCLIMYLIIIADVLSGNQPEGEVHLGILQQWFGIQWWNSREFALLVTLVLVLLPLVLYRRVESLKFSSAISTLLAVVFVTICTALAIIALVEGKTQTPRLFPRLDHQTSFFDLFTAVPVIVTAYTFHFNVHPIGFELAKPSDMTTAVRIALLLCAVIYFSIGLFGYLLFGDSTQSDILVNFDQNADSAVGSLLNTLVRLSYAFHVMLAFPLLNFSLRANIDEFFFPKKPLLATDSKRFVSLTLILLIFSFVAAIVVPDIWYIFQFMGSTSAVCLAFVFPGSIVLRDSHGISTRRDKIIALVMVILAVVTSVIAISTNISKFFL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00772 433 PANTHER AMINO ACID TRANSPORTER 19 419 - -
Rops9g00772 433 Pfam Transmembrane amino acid transporter protein 22 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00772 Rops-Chr9 12192917 12195767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00772 1 428 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.606 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00772 - - tpra:123881388 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00772 9 12192917 12195767 Rops11g03893 11 72906641 72908818 PCT