Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00769 ATGGTTTCTAGGGATCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACAACTTCGTTCTATTACTAACTCTCACGCTCTAAACAAAACCTCGATCATAGTTGATGCATCAAAGTATATCGAAAAGCTAAAGCAAAAAGTAGAAAGACTGAATCAAGAAATAGCCTCTGCAGAAACTTCAAGTGTCAACAATTCCTTGCCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTCCTTATAAATGTTTTTTCAGCAAAAGATTGCCCAGGTCTTCTTGTTTCCATTCTGGAGGCCTTTGAAGAGATGAGACTTACAGTGCTTGAAGCTAGGGTTTCTTTAACGGACACTTTTCGATTTCAAGCAGTTGGAGAAGATGAAGAACAAGGTGAAACTATTGATGCACAAGCTGTGAAACAAGCGGTGGGACAAGCAATAAAGAATTGGAGCGAAAGTGCTGATCAAGAGTAA 468 0.3974 MVSRDQKRAALHEKLQQLRSITNSHALNKTSIIVDASKYIEKLKQKVERLNQEIASAETSSVNNSLPMVTVETLEKGFLINVFSAKDCPGLLVSILEAFEEMRLTVLEARVSLTDTFRFQAVGEDEEQGETIDAQAVKQAVGQAIKNWSESADQE* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00769 155 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 58 IPR036638 GO:0046983
Rops9g00769 155 Coils Coil 33 60 - -
Rops9g00769 155 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Rops9g00769 155 CDD ACT_UUR-ACR-like 83 145 - -
Rops9g00769 155 Gene3D - 4 65 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00769 Rops-Chr9 12131047 12133128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00769 - - gmx:100306253 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03891 11 72893143 72894913 Rops9g00769 9 12131047 12133128 ECH
Rops11g02301 11 38710533 38711901 Rops9g00769 9 12131047 12133128 ECH
Rops9g00769 9 12131047 12133128 Rops9g00769 9 12131047 12133128 ECH
Rops11g03891 11 72893143 72894913 Rops9g00769 9 12131047 12133128 PCT