Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00764 ATGTCCAGAGAAAGGGAGAGATTTGAAGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGATTCTTCTCAAAAGGGAAGAAGACACATGTTAGGCTCTCCTGGAACGCTAAATACCACTACCCCTTGTGCTGCATGTAAGCTTTTGAGACGAAGGTGTGCACAAGAATGTCCCTTTTCTCCATATTTCTCTCCCCACGAGCCCCAGAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCCAGCAACGTTTCAAAGATGCTAATGGAGGTACCTGAGAGTCAGAGAGCTGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTAAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCTTCTTTGCAACAGCAAGTTCAATCTTTAATAGCTGACCTTAATGCAGTAAGAGCAGAAATACTTAAATACAAACTCAGGGAAGCCACCAACAACATGTTACCCTCCTCTCATGTTTTGGTTCCTTCTTCCGAGGTTGTATCAATTGCTGCTGCTCCTCCACCTCCAACATTATCAATGCCTTCTCTTCCTACAACTTCTTCTTCTTCTTCCATTTACACCCTACAGGCGACTCCTACTGATTATAGTACAATTTCAAATGATAATATTTCCTATTTTGGTTAA 648 0.4228 MSRERERFEEIGKKIKREGDDSSQKGRRHMLGSPGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLIADLNAVRAEILKYKLREATNNMLPSSHVLVPSSEVVSIAAAPPPPTLSMPSLPTTSSSSSIYTLQATPTDYSTISNDNISYFG* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00764 215 Pfam Lateral organ boundaries (LOB) domain 42 138 IPR004883 -
Rops9g00764 215 Coils Coil 121 141 - -
Rops9g00764 215 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Rops9g00764 215 MobiDBLite consensus disorder prediction 1 36 - -
Rops9g00764 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 166 - -
Rops9g00764 215 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00764 Rops-Chr9 12057508 12058446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00764 27 155 AS2 family AT2G40470 86.822 5.41e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops9g00764 LOB 9.4e-40 No_clan