Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00743 ATGGCAACCATGATGACCAGGCTCAAGTATGTGGTGGTAGCATGGATCACCATTGCACCCCAAGGAACCAAGCTCTTACCTTTTCCTTGCGTCACCACCACTGTCACAGCGATGCTTCAAGTCTTCTTCTGTGAATGCCGACAAGGATTTAGTGTCGTGGAATACCATGATGGGCTACAGGGCCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCGTGTCAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGAAGCCTCGAAAACCATTTATTTAGGAGATCCCTGCCTTTTCCATGGTCCAATAGGATGAACATTGCACTAGGAGCTGCTAAGGGTCTCGTTTTTCTTCATGAAGAAGCTGAACGACCAGGAGGACAGTATGGTTCCGTTTATGGGTCTGCTGCTTTGAGCACTGCACAACAGGTTCCTTCATTGAGTACCAAGGGAGCTGCATCATCAGCTTTAGAAAGTCGTGGAGGTTATGCGTTGGGTGTTTCAGATCCCCCTAAGTTTACTTCTGGAGACTATGTCTCATCCTCAAGCCCATCCTTGGCACAAGGTGCGCATCAAGGCTTCTCTGATATTTGTCCCGTCTTCACTGCGCTGAAAGCATGTGCATGTCCCTTCCCTGACGAGCTTTGTGAGCCAAATGCCTGA 714 0.4762 MATMMTRLKYVVVAWITIAPQGTKLLPFPCVTTTVTAMLQVFFCECRQGFSVVEYHDGLQGHKEWLAEVNFLGDLVHPNRVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPFPWSNRMNIALGAAKGLVFLHEEAERPGGQYGSVYGSAALSTAQQVPSLSTKGAASSALESRGGYALGVSDPPKFTSGDYVSSSSPSLAQGAHQGFSDICPVFTALKACACPFPDELCEPNA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00743 237 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00743 237 PANTHER OS01G0588500 PROTEIN-RELATED 54 139 - -
Rops9g00743 237 Pfam Protein tyrosine and serine/threonine kinase 61 138 IPR001245 GO:0004672|GO:0006468
Rops9g00743 237 SMART tyrkin_6 33 218 IPR020635 GO:0004713|GO:0006468
Rops9g00743 237 Gene3D Transferase(Phosphotransferase) domain 1 47 199 - -
Rops9g00743 237 SUPERFAMILY Protein kinase-like (PK-like) 58 137 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00743 Rops-Chr9 11381269 11382491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00743 56 142 Glycoside Hydrolase AT3G07070 52.222 6.24e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops9g00743 PK_Tyr_Ser-Thr 3.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00743 - - egt:105974701 174.866