Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00724 ATGGAAGCCACTCTAACTTCTTATATGAAATTCACCACCTTTCATTCTAATGCTTCAAACTACAACACCTTTTTGTACCCTTTAATCCCTTATTTGCTAAATAAACTATTCTTCAAAAGTTCTGAAATGATTTCCCAGCTCAGTCAAAACCACCTCTCTCTTTTCTTCCATGCTACACATAAAATTTCACCTGCAACAAAAAACCCTTTTTCTGTTTTCCTCAAAGTTACAAACTTTAGTAATTCTAAGGCTACCCATGTTCTTCAAGTTCCTCAAGTGTATTGTTTTCAGTCATCCAATTCTGTGAAACGGTTATCTCGTTCTGCAAGAGCCAAAGTGCAAGATGTGCTGTTAGATTACTTGCATTCAAGTAGGGGATATAGTTTCATGGATGCTGAGTTCATTGGCAAGAACTCACCACATTTCATTCAAGGTTTGGTGTCAGAGTTTCGTGGAGAATATGATGATGATGATGATGATGTTGCAGGGTCTTTAAGGAAGTTCCTGAGGTATAATCCCATTAATGAATTTGAACCTTTTTTTGAGAGTTTAGGAATAAGCCCTCGTGAGTTGCCTTTTTTCCTGCCACGTGGCATGATATATTTGTCTGATGATGATGTTTTACTTGACAATTTTCATGCTTTGACTAATTATGGTGTCCCAAGAAATAGGATAGGGAAAATTCTTAAGGAAGCAAAAGAAGTTTTTGGATATCCTAGTGGATTGTTGTCATTGAAATTTCGAGCTTATGAAAATTTGGGTTTGAGTAGATCCACTGTGATAAAGCTTATTGTTGGTTGCCCTTCACTTTTGATTGGTGAAACAAGTAGTGAATTAGTCATGGTTCTTGATTGGTTGAAGAAAATTGGATTTGAGCATGATTGGATTGGGAATTACTTGTCTTGTTCGAAAACATATAACATGAAAAGAATGCTTGATGCTATACAATTTCTTCATAAAGTGGGATGTTCTGAGAATCAGATGCACAATTTGTTCAAGGAAAATCCTGCACTATTGTTGGAAGGTCTTGAGAAGAAGGTGTATGTGTTTTTGGGTCTGTCACTTAAGTTAGGTCTCAAGAAGAATGTGATTTATTCTTCTTTTATAGAATATCCCCATATCTTATCAAGTAAGTCTTCAAAAAATCTTTTGAGAGTGGTTAGATTTTTGTATTATATTGGAGTGAGCACAGATGACATTGCAGACATTTTGTCTAACCACATGCATCACCTGTGCTCTCATCCATTGAAAGGCCCTAAAGCTGTTTGTTGTCAGTTAAAAATTGGAAAAGCTGATTTATGCCAAATCATAAAGGATGATCCGCTGAAGTTGATTGTTTTGGCTTCAAAACTTAAACAGAATAGTGTTGTACAGCTATCTTGTGATGACTCAAGTATACATTTGCTGAAAACAACATTCTTGCTGAAATTGGGATATGCAGAGAACTCTGAGGAGATGGCAAAAGCATCAAAAAGCTTCCGAGGAAGAGGTGATCAATTACAGGAGAGGTTTGATTGCCTAGTTGAAGCTGGTTTGGACTATAACACTGCAATCAACTTGATAAAACGTGCTCCTATGATTCTAAACCAGAGCAAAGTCGTGATTGAAAAGAAGATTGATTTCTTAAGAAACATTTTAGGTTACCCATTAGAATGTGTAGAGGCATTTCCAGCATACTTATGCTATGATTTGGAGAGAATTATGCTCAGATTTTCAATGTATGCGTGGGTGAAGGAGAGGAATGTGGTAAATCCTATGTTGACCTTGAGCACTATCCTTGCATCCTCCGAGGAACGGTTTGTAAAATACTTTGTGAATGTACATCCTGAAGGTCCAATCATCTGGAAAGGTCTTAAGAGGTTATCGCAAAAAGATAAGAGCTAA 1884 0.3662 MEATLTSYMKFTTFHSNASNYNTFLYPLIPYLLNKLFFKSSEMISQLSQNHLSLFFHATHKISPATKNPFSVFLKVTNFSNSKATHVLQVPQVYCFQSSNSVKRLSRSARAKVQDVLLDYLHSSRGYSFMDAEFIGKNSPHFIQGLVSEFRGEYDDDDDDVAGSLRKFLRYNPINEFEPFFESLGISPRELPFFLPRGMIYLSDDDVLLDNFHALTNYGVPRNRIGKILKEAKEVFGYPSGLLSLKFRAYENLGLSRSTVIKLIVGCPSLLIGETSSELVMVLDWLKKIGFEHDWIGNYLSCSKTYNMKRMLDAIQFLHKVGCSENQMHNLFKENPALLLEGLEKKVYVFLGLSLKLGLKKNVIYSSFIEYPHILSSKSSKNLLRVVRFLYYIGVSTDDIADILSNHMHHLCSHPLKGPKAVCCQLKIGKADLCQIIKDDPLKLIVLASKLKQNSVVQLSCDDSSIHLLKTTFLLKLGYAENSEEMAKASKSFRGRGDQLQERFDCLVEAGLDYNTAINLIKRAPMILNQSKVVIEKKIDFLRNILGYPLECVEAFPAYLCYDLERIMLRFSMYAWVKERNVVNPMLTLSTILASSEERFVKYFVNVHPEGPIIWKGLKRLSQKDKS* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00724 627 FunFam mTERF family protein 154 305 - -
Rops9g00724 627 Gene3D Transcription termination factor 3, mitochondrial 166 345 IPR038538 -
Rops9g00724 627 Gene3D Transcription termination factor 3, mitochondrial 347 611 IPR038538 -
Rops9g00724 627 PANTHER CGI-12 PROTEIN-RELATED 119 608 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 Pfam mTERF 498 600 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 Pfam mTERF 315 544 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 366 396 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 518 549 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 226 256 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 550 581 IPR003690 GO:0003690|GO:0006355
Rops9g00724 627 SMART mt_12 483 513 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00724 Rops-Chr9 10636034 10637917 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops9g00724 mTERF 1.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00724 - - aprc:113846643 870.922