Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00723 ATGATTTTGCGACCGAATCTAAATGGCTTCTTTCTTTTCCACCCTTCCATGCATCAGAAACCTATCTCAAGCCAAAACCCATCTTCTGTTTCTCTCAAAGTTCGAAACTTTCGCAGTTCCAAGGCTACCCATGTTCCTGTTTTGTCTCCAGTGAGTCCCACCCGGCTGTCTCGGGTTGTGAAAACTGAAGCACAGGTTGTACTAATGGATTACCTTCATTCAACTCGTGGTTACAGCTTTTTGGATGCTGAATACATAAGCAAGAACTCACCACGTTTCATTGAATCTTTGGTGTCTAAAATTGATTGCCATGGTGGTGTTGCTAGATCATTGAGGAAGTTCTTAAGGTATAACCCTGTTAATGAATTTGAACCATTTTTTGAGAGTTTAGGGATTAGCCAATCTGAGTTACCTTTGGTTCTTCCTCATGACATGATTTTCTTGAATGATGATCATTTTTTGCTTGATAATTTTCATGTTTTGTGTAATTATGGGGTGCCAAGAAACAGAATGGGAAAAATTTATGAGGAAGCAAAAGAGGTTTTTGGATATGACGATGGATTGTTGTTATCAAAGTTTCAAGCTTTTGAAAGTTTGGGGTTGAGTAAATCAACAATCATCAAGCTTGTTGTATGTTGTCCTTCACTTTTGGTTGGGGATATGGATTGTGAATTTGTTATTGTTGTTGATTGGTTGAAGAAAATTGGGATTGAAAGTGATTGGATTGTGAATTACATGTCTAGTTCAAGAACATATAGTTGGAAAAGAATGCTTGATACCATGCAATTTCTTCATAAAGTTGGCTATTCTGAGAAACATATGCACAATTTGTTAAAGGAAAATCCTAAATTATTATTGGAAGGTTTTGGGAAGAAGCTGTACTTGTTTTTGGGACGATCACTTAAGTTGGGTGTCAAGACTGATGTGATTTGTTCTTATTTTGTAGAATATCCCTATATCATGTCAAATAAGTGTGCTAAAAATCTGTTGAGAGTGATTGGTTTTTTGCATATTATTGGAATGGGAACAGATGACATTACACACATTTTGTCTAACTACATGCATCTGCTGAGCAAACATTCAGTCAAAGGTCATAAAACTGTTTGTAAGGAGTTAGAAGTTGGAAGAGCTGAGTTATGCCAAATGATAAAGGATGCTCCATTAAAGCTAATTAGTTTGGCCTCAAAACTGGAACAGAAGAGTACTGAACAGGTTTTCAGTCATGACCCATGTAATTATTTGGAAAAAACAACTTTCTTGCTGAAACTGGGGTATACTGAGAACTCTGAGGAGATGGCAAAAGCTTTAAAAATGTTTCGAGGAAGAGGTGATAAATTACAAGAGAGGTTTGATTGCTTGGTAGAAGCTGGTTTGGACTATAACAGTGTGATCGAAATGATAAAAAGAACTCCTATGATTCTAAACCAGAAAAGAATTGTAATTCAAAAGAAGATTGATTTCTTAAAAAATTTAGGTTACCCTGTGGAATATCTTGTGGGATTCCCATCATACTTTTGCCATGATTTGCAGAAAATTGTTGAAAGATTTTCTATGTATGCGTGGCTGAAGGAGAGGAATGCAGTTAATCCTGCATTAACCTTGAGCACCATTGTTTCATCTAACGATAAACGTTTTGTAAAATACTTTGTGAATATGCATCCTCAAGGTCCAACCATCTGGAAAAGTCTGAAAAGGTTATCAAACAAAGATGAGCACTAA 1719 0.3618 MILRPNLNGFFLFHPSMHQKPISSQNPSSVSLKVRNFRSSKATHVPVLSPVSPTRLSRVVKTEAQVVLMDYLHSTRGYSFLDAEYISKNSPRFIESLVSKIDCHGGVARSLRKFLRYNPVNEFEPFFESLGISQSELPLVLPHDMIFLNDDHFLLDNFHVLCNYGVPRNRMGKIYEEAKEVFGYDDGLLLSKFQAFESLGLSKSTIIKLVVCCPSLLVGDMDCEFVIVVDWLKKIGIESDWIVNYMSSSRTYSWKRMLDTMQFLHKVGYSEKHMHNLLKENPKLLLEGFGKKLYLFLGRSLKLGVKTDVICSYFVEYPYIMSNKCAKNLLRVIGFLHIIGMGTDDITHILSNYMHLLSKHSVKGHKTVCKELEVGRAELCQMIKDAPLKLISLASKLEQKSTEQVFSHDPCNYLEKTTFLLKLGYTENSEEMAKALKMFRGRGDKLQERFDCLVEAGLDYNSVIEMIKRTPMILNQKRIVIQKKIDFLKNLGYPVEYLVGFPSYFCHDLQKIVERFSMYAWLKERNAVNPALTLSTIVSSNDKRFVKYFVNMHPQGPTIWKSLKRLSNKDEH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00723 572 PANTHER CGI-12 PROTEIN-RELATED 67 240 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 SMART mt_12 495 528 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 SMART mt_12 429 459 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 SMART mt_12 464 494 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 Gene3D Transcription termination factor 3, mitochondrial 107 224 IPR038538 -
Rops9g00723 572 Gene3D Transcription termination factor 3, mitochondrial 291 561 IPR038538 -
Rops9g00723 572 FunFam mTERF family protein 100 251 - -
Rops9g00723 572 Pfam mTERF 437 545 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 Pfam mTERF 125 220 IPR003690 GO:0003690|GO:0006355
Rops9g00723 572 Pfam mTERF 261 492 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00723 Rops-Chr9 10632300 10634018 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops9g00723 mTERF 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00723 - - gmx:100803162 843.958