Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00711 ATGATCCCTAACAAAACGAAAGTTTCAAACTTTGATATGCAAGTGGCATCAGAAGTTCAACAGCACCATCACCAGCAACAGCAAAGGCACCAAGAAACCCAGATGTGTAGAAAGATCCAATTGAGTGTCTCCGACAATAACCTTAATCACTCCACCACCGTTGATGGTGGAGGCTGTGACAAAATGGACGGTGAAGATCCCTTCATCCCACCCCTCAATTTCGCCATGGTTGATAATGGCATTTTCCGTTCAGGTTTCCCTGAACCTGCCAACTTCTCCTTCCTTCAAACCATTGGACTTCGCTCTATCATATATTTGTGTCCTGAGCCATATCCGGAGGCTAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCAGTTTGGGATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTGTCCTTGATGTCAGGAATCACCCAGTTATAATTCACTGTAAGCGAGGAAAGCACCGAACAGGTTGTTTGGTAGGATGCTATAGGAAATTGCAAAAATGGTGCTTATCCTCTGTCTTTGATGAGTACCAACGCTTTGCAGCTGCCAAAGCAAGAGTTTCAGATCAGAGCTTGTGA 630 0.4444 MIPNKTKVSNFDMQVASEVQQHHHQQQQRHQETQMCRKIQLSVSDNNLNHSTTVDGGGCDKMDGEDPFIPPLNFAMVDNGIFRSGFPEPANFSFLQTIGLRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQSL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00711 209 Gene3D Protein tyrosine phosphatase superfamily 68 209 IPR029021 -
Rops9g00711 209 PANTHER TYROSINE-PROTEIN PHOSPHATASE 35 208 - -
Rops9g00711 209 FunFam probable tyrosine-protein phosphatase At1g05000 67 209 - -
Rops9g00711 209 Pfam Tyrosine phosphatase family 69 208 IPR004861 -
Rops9g00711 209 CDD PFA-DSP_Siw14 68 207 - -
Rops9g00711 209 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 67 207 IPR029021 -
Rops9g00711 209 ProSiteProfiles Dual specificity protein phosphatase domain profile. 73 209 IPR020422 GO:0006470|GO:0008138
Rops9g00711 209 PRINTS Plant and fungal dual specificity phosphatase signature 124 138 IPR020428 GO:0016791
Rops9g00711 209 PRINTS Plant and fungal dual specificity phosphatase signature 105 118 IPR020428 GO:0016791
Rops9g00711 209 PRINTS Plant and fungal dual specificity phosphatase signature 68 85 IPR020428 GO:0016791
Rops9g00711 209 PRINTS Plant and fungal dual specificity phosphatase signature 141 155 IPR020428 GO:0016791
Rops9g00711 209 ProSitePatterns Tyrosine specific protein phosphatases active site. 163 173 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00711 Rops-Chr9 10488576 10491741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00711 50 207 Protein tyrosine phosphatase (PTP) family AT4G03960 70.886 2.44e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00711 K18045 - gmx:100814279 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00711 9 10488576 10491741 Rops9g00711 9 10488576 10491741 ECH