Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00699 ATGGAAAACACCTTGGTACACATAGCAGCTTGGTATGGCAACAATGAGGTAGTGGATTTTGTAGCTGAACATGCCCCAGAGCTTCTTTTCATGGAGAACTCAAACAAGGACACTGCCCTTCATGTTGCTGCAAGAGCAGGGCGTGTCTCCACAATTGAAAGGCTGTTGGCAGCTTATACCAATTTCCAACGAAGTGGGATAGCAAAGGAGTGGATAAGATATTGGGGTTTGAAAATATCCCCTGAAGACTACAATGCCATACAAAATATGAACGGACTATTAAGATTCGTGCAAAAAAAGAATGTTCAAGAAAACATAATGTTACACGAGGCAATGATGAGTGGTAGTAGCAGTCAGGTGGGGGTTAAGATTTTCCAAGTTCTTGAACAATACAACACTAAAGACAACCAAGGGGAATCATTGTCAGAGTCTTGTTATGAATTTGCATTAGAAATTATAAACAAGGCAAAGCAGTCAGTACTGTACCTGGCGGTTGAGGTTGGGGACAAGGAAGCTGTGAAACTAATATTGAGGAAGTCCCAAAACGATTTGGACCCAAAGGGATTATCACCCCTCGTAGCAGCAATCATGATGCGGGATGAAGATATGCTCAGTATCATACTGGACATGAAGTCAGATTGGATACATTTAATGGACAAACATGAAAGGCTTCCTCTTCATTATGCAGCATCTATAGGTTACCATGAAGGTGTTATTAAGTTACTTGAGAAATGCAAGTGCTGTAGCATTCGTAAGGACAAATATGGCTACTTCCCACTTCATCTAGCATCTCATAGAGGCCATGTAGAAGTAGTTAAGGAATTGTTAGGATACTGTCTGGATCCAACAGAGATGCTTGACAAATATGGCCGTAACATTCTTCACATTGCAGCAAAAAGTGGAAAGCATGAGGTGGTATGCTACATCCTTCAAACTGATGAACATGCGAAGCTGATAAATCAAAAGGATAATGATGGAAATACCCCCTTGCATCTGGCTGCTAGTTCCTGTCATCCCAAAGTTGTCTACTACTTAACATTGGACAAAAATCCAATTTATCCCAAAGTGGATCTTGGTGTGGTTAATCAAAAGAATCAAACAGCTCTTGACATTGTAAATGCAATTTATCAACCCAAAAATCCATCCCTTAGACAGCTACTTTCATGGATTGCATTAAAATCTGCTGGTGTAAAGCCAAGTTCTAGTAAAGAACTCATCCCTGTACCAAGTGGCTGGAAACTGAATGAAATATCCCCGAAAATGGAACCGAGTAAAGACACAGTCTCTAACACCGAAGTGTATAAAGACAGAGTGGAAACACTTATATTGGTATCAACCCTTATAATCACGGCTTCAGTGGCAGCATGTTTAGCAGTACCCGGTGAGGCAGATGGAGCAGCTAAAAACCTAAAGCATGCCATGTTCCATTTTTTCATTTTCTGCATCACAATATCTTTCTTTAGTTCCATCAGTGCCACTATCATCCTCTTCTGGACACGACTGGGATTTATTCAACTGTTGGCTTACGCTATTAAAATTGTGATGCCACTTCTGGGAGTTGCTCTCATCTCACTATCTTTGGCTTTCATGGCTGTTGGAGGAGAGAAGAAAAGCATAAACCCAGAGGTATGGCAAGCTTGTGCGAGGCCACTGGTTAACCTTCCTTCACCTGGGACTCACGTGGTTTACTTCCCTCAAGGACGCAGTGAACAGGCAGATCCAGAAACAGATGAAATATATGCTAAGATGACACTTCAACAGTGCCTTTTATCAGATATTTCTCTCAAGTCGAGCAAGCCACAACCTGAGTTTTTCTGTAAACAACTGACAGCAAGTGATATGAGTATTCATGGAGGTTTCTCTGTACCCTATCATGCTGCAGAGAAGGTTTTCCCCTTCTTGGATTTGCATGATAATGTTATTGGGGATGGAATTGTAGAGCTCCTTCATAATGAAGTTGGTGTAGATGTTAAGGTCATTGGTCCTGTTGGTGGTTCAAATGAACAGATAATTATCATTACTTCAGAGGAGGATCCTGATAATGAGCTATTCTCAGCTCAGGAAGTTTTGTTACACATACAAACTCACATTGTCTATCTTGTTCTAGATAAGGACAAAACTATAACCACCAGGCTTGTTGTCCCATATAGTGATATTGAATGCTTAGATGGAAAAGATGCATCACTATCACAAATAAGGAGGTTGTCTGGTGCTCGAATTCAAATATTGCCTAGAGAAGAACTACCTCTGATGTTGCAAAAACTGATGAACTGCTCTACTGAAGGTTGCTCTAGATTAGAAACCCTCATGCCTGTTTCTTTCTCTGCTGCATCAGCAGAAGGTACATCCTTTAACCTCCACGTCCTTGCCCTGGATTGTAACTCATATTTTGGTTCTTCATTGTTGTTGGACTCTGAGGCATTCTCTTACACATTGCCATTTTTCAGATTGGCTTTTCGACTGGATGACTGA 2472 0.4106 MENTLVHIAAWYGNNEVVDFVAEHAPELLFMENSNKDTALHVAARAGRVSTIERLLAAYTNFQRSGIAKEWIRYWGLKISPEDYNAIQNMNGLLRFVQKKNVQENIMLHEAMMSGSSSQVGVKIFQVLEQYNTKDNQGESLSESCYEFALEIINKAKQSVLYLAVEVGDKEAVKLILRKSQNDLDPKGLSPLVAAIMMRDEDMLSIILDMKSDWIHLMDKHERLPLHYAASIGYHEGVIKLLEKCKCCSIRKDKYGYFPLHLASHRGHVEVVKELLGYCLDPTEMLDKYGRNILHIAAKSGKHEVVCYILQTDEHAKLINQKDNDGNTPLHLAASSCHPKVVYYLTLDKNPIYPKVDLGVVNQKNQTALDIVNAIYQPKNPSLRQLLSWIALKSAGVKPSSSKELIPVPSGWKLNEISPKMEPSKDTVSNTEVYKDRVETLILVSTLIITASVAACLAVPGEADGAAKNLKHAMFHFFIFCITISFFSSISATIILFWTRLGFIQLLAYAIKIVMPLLGVALISLSLAFMAVGGEKKSINPEVWQACARPLVNLPSPGTHVVYFPQGRSEQADPETDEIYAKMTLQQCLLSDISLKSSKPQPEFFCKQLTASDMSIHGGFSVPYHAAEKVFPFLDLHDNVIGDGIVELLHNEVGVDVKVIGPVGGSNEQIIIITSEEDPDNELFSAQEVLLHIQTHIVYLVLDKDKTITTRLVVPYSDIECLDGKDASLSQIRRLSGARIQILPREELPLMLQKLMNCSTEGCSRLETLMPVSFSAASAEGTSFNLHVLALDCNSYFGSSLLLDSEAFSYTLPFFRLAFRLDD* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00699 823 Gene3D - 1 394 IPR036770 -
Rops9g00699 823 ProSiteProfiles Ankyrin repeat profile. 325 345 IPR002110 GO:0005515
Rops9g00699 823 Gene3D - 603 653 IPR015300 -
Rops9g00699 823 ProSiteProfiles Ankyrin repeat profile. 289 321 IPR002110 GO:0005515
Rops9g00699 823 ProSiteProfiles Ankyrin repeat profile. 255 276 IPR002110 GO:0005515
Rops9g00699 823 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 3 138 - -
Rops9g00699 823 Pfam Ankyrin repeats (3 copies) 226 311 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 156 186 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 35 64 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 289 321 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 187 217 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 221 250 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 1 30 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 325 354 IPR002110 GO:0005515
Rops9g00699 823 SMART ANK_2a 255 284 IPR002110 GO:0005515
Rops9g00699 823 SUPERFAMILY Ankyrin repeat 145 372 IPR036770 -
Rops9g00699 823 ProSiteProfiles Ankyrin repeat region circular profile. 325 345 - -
Rops9g00699 823 ProSiteProfiles Ankyrin repeat region circular profile. 255 276 - -
Rops9g00699 823 SUPERFAMILY Ankyrin repeat 3 117 IPR036770 -
Rops9g00699 823 Pfam Ankyrin repeat 325 345 IPR002110 GO:0005515
Rops9g00699 823 Pfam Domain of unknown function 433 531 IPR026961 -
Rops9g00699 823 SUPERFAMILY DNA-binding pseudobarrel domain 592 637 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00699 Rops-Chr9 10261222 10280688 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00699 532 636 B3 DNA Binding Superfamily AT5G20730 47.586 1.06e-29 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00699 - - mtr:11431349 526.168