Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00696 ATGTCAAACAAAGCGTCAATGTTACGTGGAGAATCTTCCTCAAATTCTTCTAATGCATGGAGTTCATTAAAAGTTCTTCAATGGACGGGGTATCCTTTGGAAGTTCTGCCGCTAAGTGTGCAGCTAGATGAACTTGTAGACTTGAAAATGTGTCACAGCAAAATAAAAAAGATTTGGAAAGGAAATCATTTTTTCTCTAAGCTGAAGTACATTGACCTGAGCCATTCCGAAGATTTAATTCAAACTCCTATAGTTTCTGGGGCTCCATGTCTTGAAAGTTTGCTTCTTGAAGGTTGTATAAACCTTGTTAAAGTTCACAAATCTGTTGGAAAACACAAGAAGCTTGTTGTATTGAACTTGAAAGATTGCATAAAACTTGAAACCCTCCCAAGAAAATTGGAAATGGATTCTTTGGAGGAGTTGATTCTTTCTGGCTGCTCAAAAGTTAAAAGGCTCCCTAAGTTTGGAAAGAACATGGAATGTTTATCACGGCTTAGTTTGGAGGATTGCAAGAATCTTCATAATATACCAAATTTTATTTGCAATCTGAAATCTCTTAGAAAGCTCAATGTTTCTGGTTGCTCAAAAATTTCTAGGCTGCCCAACAATATGAATGGAAATGAGTCTTTGGAGGAACTTCATGTGAGTAGGACTGCTATAAGAGAAATTACTTCATCCAAAGTTTGTTTGGAGAATCTTAAAGAGCTCTCCTTTGGTGGAAGGAAAGAACTAGCATCCAACTCAAGGAACTTACTTCAAGGGATATCTAAGTTTTGGAAGAAACCAGTTCCAATGGAGTTGATCTTGCCACCTCTTTCCCATTTATCCTGCTTGAAGTTCTTGGATCTAAGTTATTGTGACCTTAATGATGCATCCATTCCGGAAGATCTTGGTTGCTTGTTGTTTTTGCTTGGCTTAGATCTAAGCGGGAACAATTTTATTAATCCACCAACTCACTGCATTAGTAATCTTTCTGTGCTGCAGAGTTTGATCTTAAATGATTGCCCAATGCTAGAGTCCTTGCCCATGCTTCCACCAAATATAAAAGATAGGCCGCATCTTTGGTTCATCATTCCGGGCAGAAAAATTCCACCATGGTTTGACAATCAAAACGTAGTTTTGATTAATCCATTACATCATCCATACAATAAGTTGGGTTGTGATTCAATTGCATCAATAACAGTGGATGTACCTGACTATTATCGATCTAGTACATGGTGGGGCATTGCAGTAAGTCTAGTATTAGAACCTTCAACTGTGAAGCAATCTTCCCCATCACATGTGAGGCCAGCTTCCAAATACAACGAGGAAACATGCATTTATTATTGGACCTGTAAAGCTCCTGATAGGGAACCTGACCTGCCTTTCCCCATAGGACCTAAATTTGGCCACCTAGTTTATGAATATAGTGACCCTTACACACATATTATATTCTTGAGTGGTGATCATGTATATATTCAGCATTATCTAAGTGGAGAGAAAAGCCAACTTGAACTCATATTTTATGTGGAGCATTCTTCTAATCCATGGAAGCCAACAATAAGGAAGTGTGGGTGCCGAGTGATATGTAAGGAAGAAGTTGAAGACAGGCTCAAGCACTCAAGTGGTCTCAACATAACAGAAATGAATGATGATAACGGTGCGTGA 1647 0.3849 MSNKASMLRGESSSNSSNAWSSLKVLQWTGYPLEVLPLSVQLDELVDLKMCHSKIKKIWKGNHFFSKLKYIDLSHSEDLIQTPIVSGAPCLESLLLEGCINLVKVHKSVGKHKKLVVLNLKDCIKLETLPRKLEMDSLEELILSGCSKVKRLPKFGKNMECLSRLSLEDCKNLHNIPNFICNLKSLRKLNVSGCSKISRLPNNMNGNESLEELHVSRTAIREITSSKVCLENLKELSFGGRKELASNSRNLLQGISKFWKKPVPMELILPPLSHLSCLKFLDLSYCDLNDASIPEDLGCLLFLLGLDLSGNNFINPPTHCISNLSVLQSLILNDCPMLESLPMLPPNIKDRPHLWFIIPGRKIPPWFDNQNVVLINPLHHPYNKLGCDSIASITVDVPDYYRSSTWWGIAVSLVLEPSTVKQSSPSHVRPASKYNEETCIYYWTCKAPDREPDLPFPIGPKFGHLVYEYSDPYTHIIFLSGDHVYIQHYLSGEKSQLELIFYVEHSSNPWKPTIRKCGCRVICKEEVEDRLKHSSGLNITEMNDDNGA* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00696 548 Pfam Leucine Rich Repeat 45 62 IPR011713 -
Rops9g00696 548 SUPERFAMILY L domain-like 17 346 - -
Rops9g00696 548 Gene3D Ribonuclease Inhibitor 3 135 IPR032675 -
Rops9g00696 548 Gene3D Ribonuclease Inhibitor 136 354 IPR032675 -
Rops9g00696 548 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 161 529 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00696 Rops-Chr9 10157189 10160700 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00696 21 238 WRKY Transcription Factor Family AT4G12020 39.024 6.66e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00696 - - gmx:100799850 704.901