Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00694 ATGCATGTCAAAGCTTCAATGTTACACGGAGAATCTTCCTCTAATGTATCCTCGCGATGGATATACCATGTTTTCTTGAGTTTTAGAGGAGAAGATACTCGTCTAGATTTTACAGACTACATATATGCTGCGTTGGTGCGAAAGGGAATCATAACTTTTCGAGATGACAAACAGCTCCAGAAAGGAGATGTGATTAATCAAGAACTCCTTAAAGCAATTGAGCAGTCCCTCTCAGCCGTTGTTATTCTCTCTGAGAACTATGCTTCTTCCTCTTGGTGTTTGGATGAGCTCCAAAAAATTCTCGAATCAAAAAGAGTGCTGGAGAGAGAAGTTTTTCCAGTTTTCTATCGAGTCAGTCCTTCTGAAGTTCAAAACCAAGAAAAGAGTTTTGCTGAGGCTTTTAGAAAACATGCAACAAGATATGATGTAGATAAGGTGCAAAAGTGGAGGGATGCCCTAACAGAAGTTGCCCTCATACCTGGTTGGGAGTCCAAGAATCAGGATGAAACAGAGCTTATTGAAAATCTTGTTGAGTCGGCAACTGAATCGATTCAAGGCATAGTTTTGGAGTCATCCCCGAAGCAATACCAAGCAAAGTGGGATTCCGAAGCCTTCTCAAAGATGAGTAATCTTGAATTACTCATTATCAATCATAATATACAACTTCCTCGTGGCCTCAAGTGTCTTTGCAGTTCATTGAGATTTCTCCAGTGGACAGATTATCCTTTGGAAGCTCTGCCTGATCGTGAGCAGCTAGATGAGATTGTAGAGTTGAAAATGTATGACAGCAAAATAACAAGGATTTGGAGTGAAACTCAATTTTTCGCAAAGCTGAAGTTCATTGATTTGAGCTATTCCAAGTATCTAATTCAAACTCCTATAGTTTCTGGGGCTCCATGTCTGGAACGTATGCTTCTTATAGGTTGTATAAACCTTGTTGAGTTTCACCAATCGGTTGGGCAGCACAAGAAGCTGCTTGTGCTGAGCTTGAAAGACTGCATAAATCTTCGAATCCTTCCAAGAAAACTTGAAATGGATTCTTTGGAGGAGCTGATTCTTTCTGGCTGCTCAAAAGTAAAAAAGCTCCCTGAGTTTGGAAAGACTATGAAGTGTTTAACACTGCTAAATTTGGAGAATTGCAAAAATCTTCTTTGCCTGCCAAACTCCATTCACAATTTGGAGTCTCTTAGAAAACTCCACATTTCTGGTTGCTCAAAATTTTCAAAGCTTCCTGATGGTATGAATGAAAATGAGTCTTTGGAGGAGCCTGATGTGAGTGGGACTGCTATAAGAGAAATTACATTATCCAAAATTCATCTAGAAAATCTTAAAGAGCTCTCCTTTGGTGGAAGGAAAGAACTAGCATCCAACTCAAAGAACTTACCTCTGTGGATCTCAAAGTTTAGGAGTTCCTTAACTTGGTTGCAGGAATTAAATTTAAGTGGGAACAATTTTGTTAACCCACCTGCTCACTGCATTAGTAATCTTTCTATGTTGCAGAATTTGTCCTTAACTAATTGTCCAAGGCTTGAGTTATTGCCTACGCTTCCACCAAATATGCAATGCTTATTTACCATTAATTCTACTCAACTGAAACCCTTCAATTTGGATGCACAAATGCTATGGAAGATCTTTGACTCAACTTTACGTTTGGATCAGATGGAAGATTGGGCAGATCCGTGGTTCATCCTACCAGGGAGTGAAATTCCATCTTGGTTTGACCATCAAGAATGCTTCTTTATTGATCCATCAGAGCATCCATATAACAAATTGGTATATTGTGATTCAGTGACATCAATAATAGTGGATGTACCTGACCACTGTAAGTCAAGTGAATGGTGGGGAATTGCAGTATGCTTAACATTAGAACCATTAAATATGGAGGCTTCATCTTCATCTAATGTGAGGCCAATTTCCACGGGCAACGAGGAAGAGTGTGTTTATTGTTGGGTCTGTAAAGCTCCTGACCGGGATCCTGACCCGAAATTTCCCATAGAATCCGAATTTGGGCACTTGGTTTATGAATTCAGTGACCCTTACATCCACATTATATTCTTGACCGAATCTTCTAAGCATTGGAAGGCAACAATAACAAAGTGTGGATGCCGTGTGATATGTAAAGAAGATATTGAAGATTGGCGCAAGGACTCACATGGTCTCAACATATCGACAATAACAGAAATGAACCACAATGAAGGATGCAGTGATGAATTGGAGGTGGAAGAGGCTACTTCTTCAAATGCACATCCTCTTCAAAGGACAAAACTACAGGCTTTGGATGCGCCTTTTGTGAAGCTAGAGAGGTTTTTTGCTTTTAAGGAGATAGATGCTCATGGATATCTGCTGCTGCTCTTACCACACTGGAATAGGATCTTTCTCATGGACATGGTGGCACGTGCTATTTTAGTCAGCTTCACTTCAGTTTCGTTCAGTTAA 2436 0.3998 MHVKASMLHGESSSNVSSRWIYHVFLSFRGEDTRLDFTDYIYAALVRKGIITFRDDKQLQKGDVINQELLKAIEQSLSAVVILSENYASSSWCLDELQKILESKRVLEREVFPVFYRVSPSEVQNQEKSFAEAFRKHATRYDVDKVQKWRDALTEVALIPGWESKNQDETELIENLVESATESIQGIVLESSPKQYQAKWDSEAFSKMSNLELLIINHNIQLPRGLKCLCSSLRFLQWTDYPLEALPDREQLDEIVELKMYDSKITRIWSETQFFAKLKFIDLSYSKYLIQTPIVSGAPCLERMLLIGCINLVEFHQSVGQHKKLLVLSLKDCINLRILPRKLEMDSLEELILSGCSKVKKLPEFGKTMKCLTLLNLENCKNLLCLPNSIHNLESLRKLHISGCSKFSKLPDGMNENESLEEPDVSGTAIREITLSKIHLENLKELSFGGRKELASNSKNLPLWISKFRSSLTWLQELNLSGNNFVNPPAHCISNLSMLQNLSLTNCPRLELLPTLPPNMQCLFTINSTQLKPFNLDAQMLWKIFDSTLRLDQMEDWADPWFILPGSEIPSWFDHQECFFIDPSEHPYNKLVYCDSVTSIIVDVPDHCKSSEWWGIAVCLTLEPLNMEASSSSNVRPISTGNEEECVYCWVCKAPDRDPDPKFPIESEFGHLVYEFSDPYIHIIFLTESSKHWKATITKCGCRVICKEDIEDWRKDSHGLNISTITEMNHNEGCSDELEVEEATSSNAHPLQRTKLQALDAPFVKLERFFAFKEIDAHGYLLLLLPHWNRIFLMDMVARAILVSFTSVSFS* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00694 811 SMART till_3 21 159 IPR000157 GO:0007165
Rops9g00694 811 Gene3D Ribonuclease Inhibitor 345 419 IPR032675 -
Rops9g00694 811 Gene3D Ribonuclease Inhibitor 194 344 IPR032675 -
Rops9g00694 811 Pfam TIR domain 22 180 IPR000157 GO:0007165
Rops9g00694 811 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 185 - -
Rops9g00694 811 SUPERFAMILY L domain-like 200 529 - -
Rops9g00694 811 Gene3D Ribonuclease Inhibitor 420 547 IPR032675 -
Rops9g00694 811 ProSiteProfiles TIR domain profile. 20 184 IPR000157 GO:0007165
Rops9g00694 811 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 185 364 IPR044974 GO:0006952
Rops9g00694 811 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Rops9g00694 811 Gene3D - 19 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00694 Rops-Chr9 10141370 10147097 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00694 178 448 WRKY Transcription Factor Family AT4G12020 35.621 2.37e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00694 - - gmx:100799850 771.541