Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00687 ATGCATGGATTTTGTTCACATCCACGTCACTCTTTTCTTGTTTATGAGTTCCTAGAAGGAGGCAGCTTGGATAAACTACTAAACAATGATACACAAGCAAAGAAGTTTGATTGGAGCAAGAGGGTGAATGTTGTTAAAGGTGTGGCAAGTGCTCTATACCATATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGTGACATATCTAGCAAGAATGTTCTTTTAGATCTGGAACATGAAGCTCGCATCTCAGACTTTGGAACAGCTAAGATTCTGAATCTTGATTCACACAATTCAACCACATTTGCAGGCACCTATGGATATGCTGCACCAGAACTTGCTTATACTAGGGAAGTGAATGAGAAATGTGATGCATTTAGTTTTGGAGTGCTTTCTTTGGAAATAATCATGGGAAAGCATCCAGGAGATCTTATTTCTTCATTGTTTTCATCATCTGTTAATCCAATAGCATCTACCATGCTATTGAAAGATGTGTTGGACCAAAGACTTCCCCATCCAAAGGAGGCAGTTGTTCAGGATGTGATCTTGATTGCAAAAATGGCATTAGCTTGCTTGAATGAAAGTCCACGTTCTCGCCCAACCATGGAAGAAGTGTACAACATGTGTGTGATGTCAAAATCACCTTTAATGGACACATTCAGCATTATCACACTTGGACAACTACTAAATTGTTGA 696 0.3951 MHGFCSHPRHSFLVYEFLEGGSLDKLLNNDTQAKKFDWSKRVNVVKGVASALYHMHHGCSPPIVHRDISSKNVLLDLEHEARISDFGTAKILNLDSHNSTTFAGTYGYAAPELAYTREVNEKCDAFSFGVLSLEIIMGKHPGDLISSLFSSSVNPIASTMLLKDVLDQRLPHPKEAVVQDVILIAKMALACLNESPRSRPTMEEVYNMCVMSKSPLMDTFSIITLGQLLNC* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00687 231 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
Rops9g00687 231 SUPERFAMILY Protein kinase-like (PK-like) 2 209 IPR011009 -
Rops9g00687 231 PANTHER LEUCINE RICH REPEAT KINASE 2 2 214 - -
Rops9g00687 231 Pfam Protein kinase domain 2 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00687 231 PIRSF ILK 1 212 - -
Rops9g00687 231 FunFam MDIS1-interacting receptor like kinase 2 18 215 - -
Rops9g00687 231 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00687 231 ProSitePatterns Tyrosine protein kinases specific active-site signature. 63 75 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00687 Rops-Chr9 9996778 10002962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00687 1 215 Receptor kinase-like Gene Family AT2G35620 39.910 5.03e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops9g00687 Pkinase 6.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00687 - - gmx:100800924 352.829