Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g00687 | ATGCATGGATTTTGTTCACATCCACGTCACTCTTTTCTTGTTTATGAGTTCCTAGAAGGAGGCAGCTTGGATAAACTACTAAACAATGATACACAAGCAAAGAAGTTTGATTGGAGCAAGAGGGTGAATGTTGTTAAAGGTGTGGCAAGTGCTCTATACCATATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGTGACATATCTAGCAAGAATGTTCTTTTAGATCTGGAACATGAAGCTCGCATCTCAGACTTTGGAACAGCTAAGATTCTGAATCTTGATTCACACAATTCAACCACATTTGCAGGCACCTATGGATATGCTGCACCAGAACTTGCTTATACTAGGGAAGTGAATGAGAAATGTGATGCATTTAGTTTTGGAGTGCTTTCTTTGGAAATAATCATGGGAAAGCATCCAGGAGATCTTATTTCTTCATTGTTTTCATCATCTGTTAATCCAATAGCATCTACCATGCTATTGAAAGATGTGTTGGACCAAAGACTTCCCCATCCAAAGGAGGCAGTTGTTCAGGATGTGATCTTGATTGCAAAAATGGCATTAGCTTGCTTGAATGAAAGTCCACGTTCTCGCCCAACCATGGAAGAAGTGTACAACATGTGTGTGATGTCAAAATCACCTTTAATGGACACATTCAGCATTATCACACTTGGACAACTACTAAATTGTTGA | 696 | 0.3951 | MHGFCSHPRHSFLVYEFLEGGSLDKLLNNDTQAKKFDWSKRVNVVKGVASALYHMHHGCSPPIVHRDISSKNVLLDLEHEARISDFGTAKILNLDSHNSTTFAGTYGYAAPELAYTREVNEKCDAFSFGVLSLEIIMGKHPGDLISSLFSSSVNPIASTMLLKDVLDQRLPHPKEAVVQDVILIAKMALACLNESPRSRPTMEEVYNMCVMSKSPLMDTFSIITLGQLLNC* | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g00687 | 231 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 213 | - | - | |
Rops9g00687 | 231 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 209 | IPR011009 | - | |
Rops9g00687 | 231 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 2 | 214 | - | - | |
Rops9g00687 | 231 | Pfam | Protein kinase domain | 2 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g00687 | 231 | PIRSF | ILK | 1 | 212 | - | - | |
Rops9g00687 | 231 | FunFam | MDIS1-interacting receptor like kinase 2 | 18 | 215 | - | - | |
Rops9g00687 | 231 | ProSiteProfiles | Protein kinase domain profile. | 1 | 217 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g00687 | 231 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 63 | 75 | IPR008266 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g00687 | Rops-Chr9 | 9996778 | 10002962 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g00687 | 1 | 215 | Receptor kinase-like Gene Family | AT2G35620 | 39.910 | 5.03e-46 | 159 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops9g00687 | Pkinase | 6.8e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g00687 | - | - | gmx:100800924 | 352.829 |