Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00680 ATGGCCAAGATGTTGTTTTCCACAACCATTGTTGTCTTGTTGATGATGAGTTTCCTTTCCACCATCCCAGAAACACAAGGGCAACAAGCTTATGTAAACAACAAGCAACTAAATTGTGGAAACACAGACAACTCCACGTTTGGCTATGTATGCAACAGCATCAGTTCTTGCCAATCTTATCTCACTTTCAAATCATCCTCACCACAATACAACACCCCTTCTTCCATATCATACCTTCTCAACTCAACACCCTCTCTCATAGCTGAATCTAACAACATCACTGATGTTGAACCAATTCCCACCGACACCATGATCACAATTCCCATCAACTGTTCCTGTTCCAACAATCTCTACCAACACAACGCCTCATACAAATTAAAGATCCAAGGAGAAACTTACTTCGCTGTTGCCAACAACACCTACCAAGCTCTCACAACATGTCAAGCTCTCATGGCTCAGAACATTTATGGTGAAAGGAACCTCACTGTTGGTGATAACCTTCACGTGCCACTCAGGTGTGCTTGTCCAACAGCGAAACAACGTGATGCTGGCTTCAAGTACTTGTTGACTTACCTTGTTTCTGAAGGGGAATCAGTTGCTTCCATTGCTGATATCTTTGGTGTTGATGAACAAAGTGTTTTGGATGCAAATGAGCTTTCTTCTAGTTCTGTTATTTTCTACTTTACACCTATTTTGGTTCCTCTCAAAAACGAGCCACCGAAAAAGTTACAAACAGTAGCTTCTCCGCCGGAGAATCAGCCGCCGCCGCCGCCAACTTCTGCAGGGGATGGAGGTTCTGGTTCTTCTACGAAATGGGTTATTGTTGGAGTCTCAGTTGGGGTTGCTTTGTTGCTTATTGTGGTTCTCCTTGTGTTTTTCCTCTTTTTCTATCGCCGCCGCCGGCAGCCGGAGATGCCGCCGCCGGTGGTCAAGCCTTTCTCTGATTCTGCAACCAAAAAGGTGTCGGAAACCACCCCAACAACCCAATCATGGTCTCTTTCTTCTGAGGGAATTCGCTATGCAATTGAGTCTTTAACTGTGTACAAGTTTGAGGAGTTGCAAAACGCCACAGGGTTTTTCAGTGAAGAGAACAAGATCAAAGGGTCTGTTTATAGAGCTTCTTTCAAGGGTGATGATGCTGCTGTTAAGGTTCTTAAAGGGGATGTTTCTGCTGAGATCAACATTCTTAAGAGGATCAACCATGCTAACATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACCTATCTTGTTTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCACACTGAGAAGAAGTACCAGAATTCTATGTCTTTGAGTTGGATGCAAAGAGTTCAGATTGCTTATGATGTAGCTGATGCACTTAATTACCTTCATAATTATACTAATCCTCTTCATATTCATAAGAATTTGAAAAGTGGTAATGTTCTTTTGGATGGTAATTTTAGAGCTAAAGTTTCAAACTTTGGGTTAGCAAGAGTGATGGAAAACCAAGGAGGGGATGATGGGGGGTTTCAATTGACAAGGCATGTGGTGGGGACTCAAGGTTACATGCCACCTGAGTATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCATTAGGGGTTGTGATTTTGGAGCTTCTTTCTGGAAGAGAAGCCATTGGTGGGGATAAGAATGGATCTGGGGAGCAGATGTTGTCAGCAACTGTGAGTGAGGTTCTTGAAGGAGACAATGTTAGGGAGAAACTTAGAGGTTTCATGGATCCAACTTTGAGGGATGAATACCCTTTGGATCTGGCATATTCCATGGCAGAGTTAGCCAAACGATGTGTTGCTCGTGACCTCAATTCAAGACCAAACATTTCTGAGGTTTTCATGACTCTGTCTAAGATTCAATCTTCTACCTTGGATTGGGATCCATCTGATGATCTTGAACGGTCAAGATCTGTTAGCCAAATCTCTGATAGCAGATAG 1983 0.4256 MAKMLFSTTIVVLLMMSFLSTIPETQGQQAYVNNKQLNCGNTDNSTFGYVCNSISSCQSYLTFKSSSPQYNTPSSISYLLNSTPSLIAESNNITDVEPIPTDTMITIPINCSCSNNLYQHNASYKLKIQGETYFAVANNTYQALTTCQALMAQNIYGERNLTVGDNLHVPLRCACPTAKQRDAGFKYLLTYLVSEGESVASIADIFGVDEQSVLDANELSSSSVIFYFTPILVPLKNEPPKKLQTVASPPENQPPPPPTSAGDGGSGSSTKWVIVGVSVGVALLLIVVLLVFFLFFYRRRRQPEMPPPVVKPFSDSATKKVSETTPTTQSWSLSSEGIRYAIESLTVYKFEELQNATGFFSEENKIKGSVYRASFKGDDAAVKVLKGDVSAEINILKRINHANIIRLSGFCVYKGNTYLVYEFAENDSLDDWLHTEKKYQNSMSLSWMQRVQIAYDVADALNYLHNYTNPLHIHKNLKSGNVLLDGNFRAKVSNFGLARVMENQGGDDGGFQLTRHVVGTQGYMPPEYIENGLITPKMDVFALGVVILELLSGREAIGGDKNGSGEQMLSATVSEVLEGDNVREKLRGFMDPTLRDEYPLDLAYSMAELAKRCVARDLNSRPNISEVFMTLSKIQSSTLDWDPSDDLERSRSVSQISDSR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00680 660 SUPERFAMILY Protein kinase-like (PK-like) 333 628 IPR011009 -
Rops9g00680 660 Pfam Protein kinase domain 387 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00680 660 ProSiteProfiles Protein kinase domain profile. 307 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00680 660 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 644 - -
Rops9g00680 660 Gene3D Phosphorylase Kinase; domain 1 339 423 - -
Rops9g00680 660 ProSiteProfiles LysM domain profile. 189 233 IPR018392 -
Rops9g00680 660 MobiDBLite consensus disorder prediction 642 660 - -
Rops9g00680 660 SMART LysM_2 123 170 IPR018392 -
Rops9g00680 660 SMART LysM_2 190 234 IPR018392 -
Rops9g00680 660 Gene3D LysM domain 178 245 IPR036779 -
Rops9g00680 660 Gene3D Transferase(Phosphotransferase) domain 1 424 651 - -
Rops9g00680 660 MobiDBLite consensus disorder prediction 242 265 - -
Rops9g00680 660 FunFam PTI1-like tyrosine-protein kinase 3 424 645 - -
Rops9g00680 660 Pfam LysM domain 191 234 IPR018392 -
Rops9g00680 660 MobiDBLite consensus disorder prediction 638 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00680 Rops-Chr9 9770595 9772826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00680 1 653 Receptor kinase-like Gene Family AT2G33580 53.235 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops9g00680 Pkinase 3.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00680 - - gmx:100818534 946.806