Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00668 ATGAAACTCAAAAATGGTTTATTTTTGTTCTTTCTGTTGCTAGAGTATGTTAGTTTCAACGTGGAATCAAAGTGTTTGAAGGGGTGTGATTTAGCTTTAGCTTCATACTATGTCATGCCTAAGGTTATTCTAGAAGAAATAACACGCTTTATACAATCAAAGATAGTGTCCAATTCTGATGTTATAACCAGGTACAACAAAGACAAAACAATCAATGGTCATCCACTATCTTTTACCAGAATCAACATTCCATTCCCATGTGACTGTATTGATGGTGAATTTCTGGGGCATGTGTTTGAGTACTCAGCTGCTGAAGGAGACACCTATGATTTGATTGCCAACATCAACTATGTCAATCTGACCACAGTTGAGCTTTTGAAGAGGTTCAACAGCTATGATCCAGATAATATACCCCCTAATGCAAAGGTTAATGTCACAGTCAATTGTTCTTGTGGGAACAGCCAGGTTTCAAAAGATTATGGGTTGTTTAGTGCCTATCCACTCAGGGCTGGTGATACTTTGCAGAATATTGCAAACCAGACTAATCTTGATGCAGTGTTGCTACAGAATTACAATCCTGGTGTCAATTTCAGCAAAGAGAGTGGGATGGTTTTCATTCCAGGAAGAGATCAAAATGGAGACTATGTTCCCTTGTACCCCAGAACAGCAGGTCTAGCTAAGGGTACTGCAGTTGGTATATCTATAGCAGGAATATGCGGGCTTCTATTGCTATTAGTAATTTGTATACATCTTAGATATTTCCAGAAGAATGAAGTAGAGAAAGCTAAATTGGCAACAGAAAATTCAGTGGGGCTTTCAACTCAAGATGTTGAAGCATCTGGTGATGCTACATATGGCACTTCAGATTCTGGTGGTACTAGCATGATTCGTATTAGGGTGGACAATTCAGCAGAGTTTTCATATGAAGAACTTGCCAGTGCCACAAATAACTTCAGTATGGCTAACAAAATTGGTCAAGGTGGTTTTGGGGTAGTCTATTATGCAGAGCTGAATGGCGAGAAGTTCTCACTAATAACACAGAAAGCTGCAATAAAAAAGATGAACATGGAAGCATCTGGAGCATTTCTTGCTGAACTGAAGGTGTTGACACGTGTTCATCACTTGAACCTGGTACGCTTGATTGGATATTGTGTTGAGGGATCCCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGCCAACATCTACGTAATTCAGATGGAGAACCTTTGCCATGGTCTACCCGCGTTCAAATTGCTCTAGATTCAGCCAGAGGTCTTGAATACATTCACGAGCATACAGTGCCTACATATATCCATCGCGACATAAAGTCCGAAAATATTTTATTAGACAAAAACTTCTGTGGAAAGGTTGCAGACTTTGGATTAACCAAGCTGATTGAAGTTGGAAGTTCATCAGTTCCCACTTCTAACATGGCAGGCACATTTGGTTACATGCCACCAGAGTATGCATATGGTAGTGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGGTAAAGGAGCTATAATCAAGGGTGATGTATCTGGTGCTGAAGCAACAGGCCTTGTAACTTTGTTTGATGAAGTTTTTGATCAGCCAGATCCAGATCCTACAGAAGGTCTTAAAAAACTGGTGGATCCTAGGCTTCGAGATAATTACTCAATTGAATCAGTTTGCAAGATTGCACAACTTGCCAAAGCATGTACAGAGAGAGAACCACATCAACGCCCAAATATGAGTTCTGTTGTGGTTGCTCTTACAACACTTACCTCAAATACTGAGGACTGGGATATTAATTCCATTTACAAAAATCCAGCTCTTGTAAATCTAATGTCTGGAAGATAG 1878 0.394 MKLKNGLFLFFLLLEYVSFNVESKCLKGCDLALASYYVMPKVILEEITRFIQSKIVSNSDVITRYNKDKTINGHPLSFTRINIPFPCDCIDGEFLGHVFEYSAAEGDTYDLIANINYVNLTTVELLKRFNSYDPDNIPPNAKVNVTVNCSCGNSQVSKDYGLFSAYPLRAGDTLQNIANQTNLDAVLLQNYNPGVNFSKESGMVFIPGRDQNGDYVPLYPRTAGLAKGTAVGISIAGICGLLLLLVICIHLRYFQKNEVEKAKLATENSVGLSTQDVEASGDATYGTSDSGGTSMIRIRVDNSAEFSYEELASATNNFSMANKIGQGGFGVVYYAELNGEKFSLITQKAAIKKMNMEASGAFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRNSDGEPLPWSTRVQIALDSARGLEYIHEHTVPTYIHRDIKSENILLDKNFCGKVADFGLTKLIEVGSSSVPTSNMAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISGKGAIIKGDVSGAEATGLVTLFDEVFDQPDPDPTEGLKKLVDPRLRDNYSIESVCKIAQLAKACTEREPHQRPNMSSVVVALTTLTSNTEDWDINSIYKNPALVNLMSGR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00668 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Rops9g00668 625 SMART serkin_6 318 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00668 625 FunFam LysM receptor kinase 2 297 395 - -
Rops9g00668 625 FunFam PTI1-like tyrosine-protein kinase 3 396 611 - -
Rops9g00668 625 ProSitePatterns Protein kinases ATP-binding region signature. 324 353 IPR017441 GO:0005524
Rops9g00668 625 SUPERFAMILY Protein kinase-like (PK-like) 293 597 IPR011009 -
Rops9g00668 625 ProSiteProfiles Protein kinase domain profile. 318 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00668 625 Gene3D Transferase(Phosphotransferase) domain 1 396 616 - -
Rops9g00668 625 Gene3D Phosphorylase Kinase; domain 1 291 395 - -
Rops9g00668 625 Pfam Protein tyrosine and serine/threonine kinase 320 596 IPR001245 GO:0004672|GO:0006468
Rops9g00668 625 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 611 IPR044812 GO:0019199|GO:0045087
Rops9g00668 625 Pfam LysM domain 169 196 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00668 Rops-Chr9 9619798 9624616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00668 1 625 Receptor kinase-like Gene Family AT3G21630 54.028 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops9g00668 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00668 - K13429 mtr:11432279 796.964