Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00650 ATGTCAGATGACATGCTCATACATTTCTCTTCCAACTCTTCCAACCAATCAGACCAATCACTGCCTACAAAGATTGCAAAGCTTGAAGCTCGAATGGTGGGAAAGGCTTCCTCCACTGCTTCTCAGCAACCAGGTTGGCCCTCTGTTCCTTCTTCAGCTGGGAAATTCAGTGGAGCTGCTGAAGATTTGGCTGAACCATCAACTTCAAGTGATTCTGATGACGATAACGGTGGGGAATTCTTAATTCAAGCCAACACACAGAAGCGCCAAAAACTTCAAGAAGATGATAACTCTAACGTTTTTGAGCCTATTGAGGTTGTTACTGATGGAAGACTAACTAGTTTGGAGGCTGTGGAGACAAAAACTAATGTTGATGTGAATAGAAAGAAACATGGTCGTGGAAGAGGGAGTTCTGGTTCAGGTAGGGGCCGTGGTTCCAGAGTTAATGATCAGACCAGAACACAAATTTCTCCTCCAACTGTTTTGGCTTCAAATGGTCAGATTGAGAATGTATACCATAAAGATGGCAGACTCAAAGATCAGTTTCATAATGATAGTAGTGCTTCACTAGAGGAGGAAGTTGCATCTTTACGGGCAAAAGTTGTTGCATTGGAGGAGGACTTGCGTAAATCAAAGCAAGAAACCTCCGATAATCAGAATCTTTGTCAACAGTTAGAAAAGGAATTGAAGGACCTGAAAGAACATGAACAACAAATGAAGCCTAAGAGAACGAAAATAATATCTGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACAAGAGGCAAGGCTGAAAGTACGACAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCTGAGACCTGGGAAGATGGTCAAGCATTAAAGGATCTGAATGCCCAGCTCAGACAACTATTAGAAACAAAGGAGGCAATTGAACGGCAGCGCAAATTATTTAAGAAAAAACAATCTGATAAGGGTGATGGAACAGATGCGGAGGCTGGATTACCAGAAGATGTTCTCATGCACGATGAAATTTATAAGTCTCGATTAGCTAGCATTAAACGAGAAGAAGAAATTATTTTGCGGGAGAGGGATCGGTATGAACTAGAGAAAGGGAGACTGATTCGTGAAATGAAACGCATAAGGGATGAAGATGGTTCACGGTTTAACAACTTTCAGATTCTCAATCATCGTTATGCCCTTCTAAACCTTCTTGGGAAGGGAGGATTCAGTGAGGTGTACAAGCAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCCTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGGCATGCAATTCGGGAGTATAATATTCACAAGACCCTGGTCCATTGTCACATTGTTCGTTTATGGGACATCTTTGAGATTGATCAAAATACATTCTGCACTGTTCTAGAGTACTGTAGTGGGAAGGATCTTGATGCTGTCCTTAAAGCAACACCTATATTGCCTGAGAGGGAGGCTAGGGTCATTCTAGTTCAGATTTTTCAAGGCCTTATTTACATGAATAAAAGAACACAGAAGATTATCCATTATGATTTAAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGTATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATAGTGGAGGACGATGTCGGATCCCAGGGTATGGAGCTCACATCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTATTATGTTCTATCAAATGCTCTTTGGCAAACGTCCTTTTGGACATGACCAAACACAAGAGAGAATACTTCGTGAAGACACGATTATTAAGGCACGCAAGGTTGAATTTCCTCCTAGACCTACTGTTTCTAATGAGGCAAAGGATTTTATTCGGCGGTGTCTAACATATAACCAAGCTGAGAGACCAGATGTATTAACCATTGCTCAAGATCCATATCTCACTTACTCAAAGAAGTAA 2040 0.4142 MSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKASSTASQQPGWPSVPSSAGKFSGAAEDLAEPSTSSDSDDDNGGEFLIQANTQKRQKLQEDDNSNVFEPIEVVTDGRLTSLEAVETKTNVDVNRKKHGRGRGSSGSGRGRGSRVNDQTRTQISPPTVLASNGQIENVYHKDGRLKDQFHNDSSASLEEEVASLRAKVVALEEDLRKSKQETSDNQNLCQQLEKELKDLKEHEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLRQLLETKEAIERQRKLFKKKQSDKGDGTDAEAGLPEDVLMHDEIYKSRLASIKREEEIILRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKQAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHCHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGIMFYQMLFGKRPFGHDQTQERILREDTIIKARKVEFPPRPTVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00650 679 MobiDBLite consensus disorder prediction 35 50 - -
Rops9g00650 679 Pfam Protein kinase domain 401 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00650 679 SUPERFAMILY Protein kinase-like (PK-like) 392 675 IPR011009 -
Rops9g00650 679 MobiDBLite consensus disorder prediction 63 79 - -
Rops9g00650 679 PANTHER MIXED LINEAGE PROTEIN KINASE 11 678 - -
Rops9g00650 679 Coils Coil 295 322 - -
Rops9g00650 679 MobiDBLite consensus disorder prediction 1 23 - -
Rops9g00650 679 MobiDBLite consensus disorder prediction 118 159 - -
Rops9g00650 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Rops9g00650 679 MobiDBLite consensus disorder prediction 142 159 - -
Rops9g00650 679 FunFam Serine/threonine-protein kinase TOUSLED 391 679 - -
Rops9g00650 679 SMART serkin_6 400 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00650 679 Coils Coil 187 238 - -
Rops9g00650 679 CDD STKc_TLK 399 673 - -
Rops9g00650 679 MobiDBLite consensus disorder prediction 1 79 - -
Rops9g00650 679 ProSiteProfiles Protein kinase domain profile. 400 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00650 679 Gene3D Transferase(Phosphotransferase) domain 1 391 679 - -
Rops9g00650 679 Coils Coil 351 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00650 Rops-Chr9 9232115 9240953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00650 383 679 MAP Kinase Kinase Kinase AT3G13530 27.632 5.47e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Rops9g00650 Pkinase 6.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00650 K08864 - gmx:100805168 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00650 9 9232115 9240953 Rops9g00650 9 9232115 9240953 ECH