Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00629 ATGGATGTTCAAGTGATAAACGTGGGAGAAGGAAGTGGTCATCAAGTCATGGCAAATGGTGGGGGTGCTGAACCTGGTGAAGGTGAAGTTAGTAATAATGGAATCTCTGGATCTCATGTTAAGGATGGGGTTTCTGAACCATGTGTGGGGATGGAATTTGATTCTGAAGATGCTGCAAAGACTTTCTATGATGAATATGCCAGACGCTTGGGTTTCAGCACTGGAGCTGGCTCGCGTGGTCAATTTGATGGGGCAAATATGTACCGGGAATTCATGTGTGGTAGGGAAGGTTTGAAGAGAAAGCTTACTGAAAGTTGCAGCGCAATGATTAGGATAGAGCAAAAAGGTCAAAATAAGTGGGTTGTTACGAAATTTGTGAAGGAGCATAGTCATTCCATGGTGAGCCCTATTAAGGTGAATAAGCTTCGACCACGCAAGCACTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGTGGTGTCATGTATGTATCTATGGATGGGAATCACATTTCCACTGAGAACTTTCATGGGAATAGAAATAACCGCACAGATGCTGCTGCTGCTGCTGCTGAAACAAGCCCCCCAGTTAAAAATCCCGTGTCTATGAATTATACTGTTAAAAATCCCGTGTCTATGAATTATACTGTTAGACCACCTATTCAAAAGAGGATGTTAGGGAGAGAAGCTCAGAACCTGCTGGAGTATTTTAAGAAAGTGCAGGCTGAGAACCCTGGTTTCTTCTACGCAATACAACTTGATGAAGATAATCACATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACAGCTTACAGTCATTTTGGTGATGCAGTTACTCTGGACACAGCATCCAGAGTAAATCAATATAGAGTGCCATTTGCTTCATTCACGGGGGTAAATCATCATGGTCAAATGGTTTTGTTTGGTTGTGCACTCCTTTTGGATGATTCTGAGGCTTCATTTGTGTGGCTTTTGAAGACATTTCTGACAGCGATGAATGGTCATCACCCTGTATCTATAACTACCGATCAAGACAGAGCCATACAGACAGCAGTTTCACAAGTTTTGCCTCAAGCACGCCACTGTATAAGCAACCGGCATGTCTTGCGAGAAGGTCAGGAAAAGTTGGCCCATGTATGTCACATGCATCCAAATTTTCAGATTGAACTTTATAATTGTATTAACCTGACAGAGACAATTGAGGAGTTTGATTCGACTTGGAATTCTATCATCAATAAATATGACCTCAGAAGAAATGATTGGCTTCAGTCCTTGTATAGTGCTCGTGCTAAATGGGTTCCAGCATATTTCCGTGATTCATTTTTTGCTGTAATATCTCCTAATCGAGGATTTGATGGTTCCTTTTTTGATGGTTTTGTTAACCAGCAGACAACATTACCAATGTTCTTTAGGCAATATGAACGAGCTTTGGAGAGATGGTTTGAAAAGGAAATAGAATCAGATTTTGAGACAATTTGCACCACACCAGCTCTAAAGACACCTTCGCCAATGGAGAATCAGGCTGCTAAACTTTATACACGGAAAATATTTTTGAAGTTTCAAGAAGAGCTAGTCGAAACTTTTGCTTATACTGCCAACAGAATTGAAGGAGATGGGGCAAATAGCATATTCAGAGTTGCAAAATTTGAGGATGACCAAAAGTCATATATTGTCACATTCAACCATTCTGAGTTGAGAGCCAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCTTTCTTTGTAGGCATGTTTTAACTGTTTTCACTGTCACTAATGTACTTACATTACCATCCCATTACATCTTAAAACGGTGGACCAGGAATGCAAAAAGCAGTGTTATGTCAGATGAATGTATTGGAGAATCACATGGGCGTGAGTCTCTGACATCACGGTATACCAATCTTTGTCGGGAAGCTTTCAGATATGCTGAGGAAGGGGCAATAGCTGTGGAAACTTATGATGCTGCAATGACCGCTCTAAGAGAAAGTGGAAAGAAGATTGCTGTCATGAAGAGAAGTATTGCCAAAGTTGCACCGCCTAGTCATCCAGTCAGTGGGACTGCTTATGAAGACAGGAAAACCCCTACTCCAACATCAGATACAACCCCTCTTTTATGGCCACGACAAGATGAAACAATGAGGAGGTTTAATCTTAATGATGTTGGTGCTCCTGTTCAATCAGTTGCTGATCTAAATTTACCACAAATGGCCCCAGTGTCTCTTCAGCGAGATGATGGTCCACCTGAAAACATGGCGGTTCTTCCATGTCTGAAATCAATGACGTGGGCAATGGAGAACGAAAACTCAACTCCAGGGAATAGAGTAGCTGCTATCAATCTTAAGTTGCAAGATTATAGCAGGACTCCACCAATAGAATCTGAGGTTAAGTTAAAGCTCTCTAGAGTTTCATTGGAACCAATGTTGCAGCATATGACCCACATCAGCGAACAGTTTTCAACACCAGCTAATAAGTTTGCTGTATTAAATCTCAGGGTTCTAGATAACCAGACAACTTCTGGTGGGTTTGAAGTTAAGTTTCAGGTGTCCAGGGACACATTGGGTGCTATGCTACGATCAATGGCTTACATTCGTGAGCAACTTTCTTGTTCTGGCGATGCGCAATCAGAACCTATATCAAAAAGGCCTCAGAAGTGA 2685 0.4175 MDVQVINVGEGSGHQVMANGGGAEPGEGEVSNNGISGSHVKDGVSEPCVGMEFDSEDAAKTFYDEYARRLGFSTGAGSRGQFDGANMYREFMCGREGLKRKLTESCSAMIRIEQKGQNKWVVTKFVKEHSHSMVSPIKVNKLRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGNHISTENFHGNRNNRTDAAAAAAETSPPVKNPVSMNYTVKNPVSMNYTVRPPIQKRMLGREAQNLLEYFKKVQAENPGFFYAIQLDEDNHMSNVFWADARSRTAYSHFGDAVTLDTASRVNQYRVPFASFTGVNHHGQMVLFGCALLLDDSEASFVWLLKTFLTAMNGHHPVSITTDQDRAIQTAVSQVLPQARHCISNRHVLREGQEKLAHVCHMHPNFQIELYNCINLTETIEEFDSTWNSIINKYDLRRNDWLQSLYSARAKWVPAYFRDSFFAVISPNRGFDGSFFDGFVNQQTTLPMFFRQYERALERWFEKEIESDFETICTTPALKTPSPMENQAAKLYTRKIFLKFQEELVETFAYTANRIEGDGANSIFRVAKFEDDQKSYIVTFNHSELRANCSCQMFEYSGFLCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSSVMSDECIGESHGRESLTSRYTNLCREAFRYAEEGAIAVETYDAAMTALRESGKKIAVMKRSIAKVAPPSHPVSGTAYEDRKTPTPTSDTTPLLWPRQDETMRRFNLNDVGAPVQSVADLNLPQMAPVSLQRDDGPPENMAVLPCLKSMTWAMENENSTPGNRVAAINLKLQDYSRTPPIESEVKLKLSRVSLEPMLQHMTHISEQFSTPANKFAVLNLRVLDNQTTSGGFEVKFQVSRDTLGAMLRSMAYIREQLSCSGDAQSEPISKRPQK* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00629 894 MobiDBLite consensus disorder prediction 701 715 - -
Rops9g00629 894 SMART 26again6 577 604 IPR006564 GO:0008270
Rops9g00629 894 MobiDBLite consensus disorder prediction 688 715 - -
Rops9g00629 894 Pfam SWIM zinc finger 573 600 IPR007527 GO:0008270
Rops9g00629 894 Pfam MULE transposase domain 288 379 IPR018289 -
Rops9g00629 894 ProSiteProfiles Zinc finger SWIM-type profile. 566 602 IPR007527 GO:0008270
Rops9g00629 894 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 678 IPR031052 GO:0006355
Rops9g00629 894 Pfam FAR1 DNA-binding domain 61 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00629 Rops-Chr9 8900244 8906711 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops9g00629 MULE 1e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00629 - - gmx:100807296 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00629 9 8900244 8906711 Rops9g00629 9 8900244 8906711 ECH