Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00617 ATGCCTGGATTAGGAGCTACTAGGAAAGGAATGAAGGCTATGTGCTTGATGTTGTTGTTGTTGTTGGTGGATAGTGCATTGGGGAATTCAGATGTTGATGTACTCCTTGAACTCAAGAAGAGTATTCAGAATGACCCTTCTGGATTAGTTGTTAATTCTTGGGATTCAAAGTCTTTAGGTTCAGATGGATGTCCTCAGAACTGGTATGGGATATTGTGTAGTGAAGGCAATGTTATATCAATCAATTTGGATAATGCTGGTTTAGTTGGAGAGTTCAATTTCCTTGCTATTAATGGCCTTACAATGCTGCGCAACTTGTCAGTGGCGAACAACCAGTTCACAGGAAATATCTCACATATTGGTCCAATGAAATCACTTGAATTTTTTGATTTGTCCCTCAACAAGTTTAATGGGCCGTTACTCTCTAACTTTCTTGAATTGCGTAATTTGGTATATCTGAATCTTTCTTCAAATGAACTTAGTGGTACTCTTCCAATTGGGTTTCAAAAGCTTGAGAAGTTGAAGTATTTAGATTTTCACTCTAATAACTTCTCTGGGAATATTATGCATATCTTTGCTCAGATGGGTAGTGTGCTACATGTTGACTTAAGCAGTAATAGGTTATCTGGTACACTGGATTTGGGGCTTGGAGATGACTCCTTTCTCTCCTCAATTCAATATTTGAATATTAGCCACAATTCCTTGACTGGTCAGCTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTTTTTGATGCTAGTAATAATCAGCTAGTGGGTAATATACCTTCCTTCGCGTTTGTGGTATCTCTAAGGATTCTTCGACTTGCATGCAACCAGTTGACAGGTTCACTGCCAGAAACTTTATTGAAGGAAAGTTCAATGGTTTTGTCTGAACTGGATATTGGTCAAAACAAGCTTGAAGGTCCCATTGGAAGTATTACCTCAGTAACCCTCAGGAAGCTTAATGCATCTTCAAACAAATTGTCAGGTCCCTTACCTCTCAAGGTTGGCCACTGTGCCATCATAGATTTGAGTAATAACATGCTATCAGGTAATTTGTCAAGGATCAAGTATTGGGGTAACTATGTGGAAGTTATTCAGCTAAGTACAAACTCATTGACAGGAATGCTGCCAAATGAAACTACTCAATTTTTAAGGTTAACTGCACTCAAGGTATCCAATAACTCATTGGAGGGCGTTCTCCCACCAGTCTTGGGAACATATCCAGAGCTAAAAGAGATTGATCTTAGCCTTAACCAGCTTTCTGGGTTCCCCCTACCAAGCCTTTTCACATCAACCAAATTGATTAATCTTAACCTCTCAAACAATCAGTTTTCTGGACCAATTCCTATTCAACTTCAATTTACAAATAATCCATTGGTTTCTGCTGAAAATTTTAGTCTGGTATTTCTTGATCTTTCACACAACAACTTAAGTGGGCCACTTCCTTCAAAAATGGGTAAGCTTCACAATTTGGCTTATCTCAATCTTTGTAACAACAAATTGGAAGGTACTATTCCTGATGATCTTCCAGATGAATTGAGAGGATTCAATGTGTCCTTTAATAATCTTTCTGGTGTTGTACCAGACAACTTAAAGCAGTTTCCTGAATCGGCATTTCATCCTGGAAATACTTTGCTAGTATTTCCATATTCGCAATTATCACCAAAAGATACTTCCAACTCAGGTTTTAGGGAACATGGGTTACATAAAAAATCTGCAACTAGAAGTGCCTTGATTGCATGTTTGGTTACTGGTGCTTTTGTGATGGCTATTGTGGGTATAATTATTTATTATAGGGTTCATCAGCAAAAAGAAAGGACTTCTAAACAAAATACAGCAAGTGGCATCATACAAGAGAGTACTTCCACATCAAAGAGGGAGGCACCTCACAGAAATTTGGAATCATTACCACCTTCTCAAAGGGGGCCTGCTGATGATACCAGAAATATTCATCCAATGGTAAAGAAGCCAAAAGATCTTGACCATCCTGAATTAGTTAAGAGTGAGGGAGGAATGTCTTCTCCAATGTCTATTTTGTCAGCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAGAATCCTGTTTCCCTCAAAGTATCCTCTCCAGATAAACTGGTTGGTGACTTGCATCTATTTGATGGATCCTTGGGGCTAACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGTTGTCATGGAACACTCTACAAAGCTACACTTGACTCTGGTCATGCATTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTTGGGACTATCAGGCATCCAAACCTGGTTTCTATTCAGGGTTACTACCTGGGGCCAAAGGAGCATGAGAGACTGATTATATCAAATTACATAAATGCACATTCTTTGGACATTTATCTCCATGAGGCAGATAAAAGAAATCTCCAACCTTTGTCTCTTGATGAAAGGCTCAGGGTGGCTGTAGAGGTGGCGCGATGTCTGCTTTACTTACACAATGAGAAAGCCATACCTCATGGCAACCTCAAATCCACAAACATTCTACTAGAAACTCCAAACAAAAATGTCTTGATAACTGACTACAGCCTGCACAGAATACTCACTGCAGCTGGTACTGCTGAACAAGTTCTGAATGCCGGCGCACTCGGTTATCGGCCTCCTGAGTTTGCTAGATCAAACAAACCATGCCCTTCCTTGAAGAGTGATGTCTATGCATTTGGAGTTGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGGGAAATAGTTTCTGGGATTCCTGGGCTTGTTGAACTTACTGACTGGGTGAGGATTTTAGCTGATCAAGATCTTTCTAGCCAGTGCTTTGATAGATACCTTGTGGACAAGCACAATGGAGAAAGACCATCTAGAATTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATTCTTCCAGCATCTGAGAGGCCTGATATGAATACTGTCTTTGATGATCTTTCAACAATAAGGTAG 3045 0.3974 MPGLGATRKGMKAMCLMLLLLLVDSALGNSDVDVLLELKKSIQNDPSGLVVNSWDSKSLGSDGCPQNWYGILCSEGNVISINLDNAGLVGEFNFLAINGLTMLRNLSVANNQFTGNISHIGPMKSLEFFDLSLNKFNGPLLSNFLELRNLVYLNLSSNELSGTLPIGFQKLEKLKYLDFHSNNFSGNIMHIFAQMGSVLHVDLSSNRLSGTLDLGLGDDSFLSSIQYLNISHNSLTGQLFAHDGMPYLDNLEVFDASNNQLVGNIPSFAFVVSLRILRLACNQLTGSLPETLLKESSMVLSELDIGQNKLEGPIGSITSVTLRKLNASSNKLSGPLPLKVGHCAIIDLSNNMLSGNLSRIKYWGNYVEVIQLSTNSLTGMLPNETTQFLRLTALKVSNNSLEGVLPPVLGTYPELKEIDLSLNQLSGFPLPSLFTSTKLINLNLSNNQFSGPIPIQLQFTNNPLVSAENFSLVFLDLSHNNLSGPLPSKMGKLHNLAYLNLCNNKLEGTIPDDLPDELRGFNVSFNNLSGVVPDNLKQFPESAFHPGNTLLVFPYSQLSPKDTSNSGFREHGLHKKSATRSALIACLVTGAFVMAIVGIIIYYRVHQQKERTSKQNTASGIIQESTSTSKREAPHRNLESLPPSQRGPADDTRNIHPMVKKPKDLDHPELVKSEGGMSSPMSILSASNPSSSKSHQFENPVSLKVSSPDKLVGDLHLFDGSLGLTAEELSCAPAEVIGRSCHGTLYKATLDSGHALAVKWLREGITKGKKELAREIKKLGTIRHPNLVSIQGYYLGPKEHERLIISNYINAHSLDIYLHEADKRNLQPLSLDERLRVAVEVARCLLYLHNEKAIPHGNLKSTNILLETPNKNVLITDYSLHRILTAAGTAEQVLNAGALGYRPPEFARSNKPCPSLKSDVYAFGVVLLELLTGRNSGEIVSGIPGLVELTDWVRILADQDLSSQCFDRYLVDKHNGERPSRILDDMLKVALRCILPASERPDMNTVFDDLSTIR* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00617 1014 MobiDBLite consensus disorder prediction 612 628 - -
Rops9g00617 1014 MobiDBLite consensus disorder prediction 612 697 - -
Rops9g00617 1014 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 239 - -
Rops9g00617 1014 Gene3D Phosphorylase Kinase; domain 1 730 808 - -
Rops9g00617 1014 SUPERFAMILY L domain-like 54 354 - -
Rops9g00617 1014 Gene3D Ribonuclease Inhibitor 193 366 IPR032675 -
Rops9g00617 1014 SMART LRR_typ_2 271 295 IPR003591 -
Rops9g00617 1014 SMART LRR_typ_2 412 436 IPR003591 -
Rops9g00617 1014 SMART LRR_typ_2 493 517 IPR003591 -
Rops9g00617 1014 SMART LRR_typ_2 147 170 IPR003591 -
Rops9g00617 1014 SMART LRR_typ_2 222 242 IPR003591 -
Rops9g00617 1014 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Rops9g00617 1014 Pfam Leucine rich repeat N-terminal domain 29 74 IPR013210 -
Rops9g00617 1014 Gene3D Ribonuclease Inhibitor 142 192 IPR032675 -
Rops9g00617 1014 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Rops9g00617 1014 Gene3D Transferase(Phosphotransferase) domain 1 810 1014 - -
Rops9g00617 1014 SUPERFAMILY Protein kinase-like (PK-like) 735 1010 IPR011009 -
Rops9g00617 1014 PANTHER OS07G0626500 PROTEIN 15 112 - -
Rops9g00617 1014 Pfam Protein tyrosine and serine/threonine kinase 735 1009 IPR001245 GO:0004672|GO:0006468
Rops9g00617 1014 Gene3D Ribonuclease Inhibitor 367 467 IPR032675 -
Rops9g00617 1014 Gene3D Ribonuclease Inhibitor 468 557 IPR032675 -
Rops9g00617 1014 MobiDBLite consensus disorder prediction 678 697 - -
Rops9g00617 1014 FunFam Leucine-rich repeat receptor-like protein kinase 716 808 - -
Rops9g00617 1014 SUPERFAMILY L domain-like 345 539 - -
Rops9g00617 1014 MobiDBLite consensus disorder prediction 653 671 - -
Rops9g00617 1014 ProSiteProfiles Protein kinase domain profile. 731 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00617 Rops-Chr9 8773763 8778035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00617 29 559 Receptor kinase-like Gene Family AT5G07280 29.861 9.91e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops9g00617 PK_Tyr_Ser-Thr 3.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00617 - - ccaj:109792420 1647.87