Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g00605 | ATGGCTGATATTTCTGTTACAAAAGCATATTGGGCAAGGAGGAAAGCACAACAGAAGCTAGAAGGTGCGGCCAAAGAACAATATGGCAGGATATGGGACTACTGTGAAGAAGTGAGGTCCAAGAATCCAGGATCAACTTTGAAGCTTGGTGGGTTGAATTCAATGTTAGGTGTTGAACATTTTCCTTCCATTCCTGTTGTTTCCAAAGTTCCCACCATCATTCTTGGCATGGATGTGTCTCATGGCTCACCAGGACAATCTGATATTCCTTCAATTGCAGCGGGTTTCCGATTTCACCTTTTGCCGTGTGTTTCTGCTACTGTTTCTCCGGATATGGATTCGTTTGGGTCTAATGGAAATGAGAATGAGGATTCTTTGCCACCACCACCTCCCGTTGTCCCTTCAGATGTTGTACCAGTCAAAGCTGAACCAGAGCTCCCCCCTGAGCCAGCTAAGAAAAAGGTTTCCCGTGTTCCAGTAGCTAGGCGTGGTCTTGGAACAAAGGGAATGAAGCTGCCCCTTCTAACCAATCACTTCAAAGTTAATGTTGCTAACAACGACGGACATTTCTTTCAGTATAGTGTCTCTGTTTCTTATGAAGATGGACGCCCTGTAGAAGGAAAGGGTGTAGGGAGAAAAGTGATAGACAGGGTTCAGGAAACTTATGATTCTGAGTTGAATGGAAAGGACTTTGCCTATGATGGTGAAAAAACACTGTTTACTATTGGCTCTCTTGCTCGAAACAAGCTTGAGTTTACAGTTGTTCTGGAGGATGTCACCTCAAACAGAAATAATGGAAACTGCAGCCCCGAAGCTCAGGGGAGTCCAAATGAGAGTGACCGGAAGAGGATGCGACGCCCCTACCGTGCCAAGACATTCAAAGTTGAGATCAGCTTTGCTGCAAAAATTCCATTGCAGGCCATTTCCAATGCCTTGCGTGGACAGGAATCAGAGAATTATCAAGAAGCCATTAGAGTGCTTGATATTATATTGAGGCAACATGCTGCTAAGCAAGGCTGCCTGCTTGTGCGCCAGTCATTCTTCCACAATGATCCTAAGAATTATGCAGATGTAGGAGGTGGTGTCCTGGGATGCAGAGGGTTCCATTCCAGTTTTAGAACTACACAAAGTGGCCTTTCTCTTAATATAGATGTCTCCACTACGATGATAATTCAACCTGGGCCTGTGGTGGACTTCTTAATTGCCAATCAAAATGTGAGAGATCCTTTTTCACTTGATTGGGCAAAGGCCAAAAGGACACTAAAAAATCTGAGGATCAAAACCAGCCCATCCAATCAAGAGTACAAAATTACAGGGCTTAGTGAACTGCCATGCAAAGAGCAGATGTTTACTCTGAAGAAGAAAGGTGGAGGTAATGGTGAAGATGTCACCGAGGAGGAAATAACTGTTTATGATTATTTTGTTAATTTTCGTAAGATAGATCTCCGGTATTCTGGTGATCTTCCATGTATCAATGTTGGCAAGCCAAAACGGCCAACTTATGTCCCCATTGAGCTTTGCTCTTTGGTATCCCTTCAACGTTATACAAAAGCACTTTCCACACTTCAAAGGGCTTCGCTAGTGGAGAAGTCCAGACAGAAGCCCCAAGAAAGGATGAGGGTTTTGTCTGATGCACTTAAAACCAGCAATTATGGCTCTGAACCCTTGCTTCGCAATTGTGGAATTTCAATTCAGTCTGGTTTTACTCAAGTTGAGGGTCGTGTTTTGCAAGCCCCAAGGTTGAAATTTGGCAATGGGGAGGATTTCAATCCAAGGAATGGGAGATGGAATTTCAATAATAAGAGATTAGTACAGCCGACTAAGGTAGAAAGGTGGGCCGTGGCTAACTTTTCTGCACGATGTGATGTACGAGGACTTGTTAGGGATCTGATTAAATGTGGAGATATGAAAGGAGTGCTGATAGAACCTCCTTTCGATGTATTCGAAGAAAATGGTCAGTTTCGGCGTGCCCCACCAGTGGTTAGAGTGGAGAAAATGTTTGAGACCATTCAGTCCAAACTTCCTGGAGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGAGCGGAAAAACTCTGATCTTTATGGTCCATGGAAGAAGAAATGTCTTGCTGAATTCGGAATCGTTACTCAGTGCATATCTCCTACAAGGGTCAACGACCAATATCTTACGAATGTTCTGTTGAAGATCAATGCTAAGCTTGGTGGGTTAAATTCAATGTTAGGTGTTGAACATTCTCCTTCCATTCCTGTTGTTTCCAAAGTCCCCACCATCATTCTTGGCATGGATGTGTCTCATGGCTCACCAGGGCAATCTGATATTCCTTCAATTGCAGCGGTTGTCAGCTCTAGACAGTGGCCTCTAATTTCAAAGTATAGGGCATGTGTGCGCACCCAGTCTCCTAAAGTTGAAATGATTGATAATTTGTTCAAGCAAGTGTCTGAAAAGGAGGATGAAGGAATCATAAGGGAGCTTCTGATTGATTTCTACACAAGTTCGGGGAAGAGAAAACCAGACAATATTATAATATTCAGGGATGGTGTCAGTGAGTCCCAGTTTAATCAAGTTTTGAACATTGAACTCAATCAAATCATTGAGGCCTGTAAATTTCTTGATGAAACATGGAACCCCAAATTTTTGGTGATTGTTGCTCAGAAGAATCATCATACAAAATTCTTCCAGCCTGGATCTCCCGACAATGTGCCTCCTGGAACTGTTATTGATAACAAAATTTGTCATCCTCGAAGTTATGATTTCTACTTGTGTGCACATGCGGGAATGATAGGTACAAGCAGGCCGACTCACTATCATGTTTTGTTAGATGAGATTGGTTTTTCTCCTGATGATCTACAGGAGCTTGTCCATTCTCTGTCTTATGTGTATCAGAGGAGTACCACCGCCATCTCTGTTGTTGCACCAATATGCTATGCTCACTTGGCTGCGTCTCAGATGGGGCAGTTCATGAAATTTGATGACAAATCTGAGACCTCCTCAAGTCATGGTGGTGTGACTGCTGCGGGCCCTGCTTCCGTACCTCAGCTGCCCAAATTGCAGGAAAATGTCTGCAACTCGATAAATTGGAAAACCCCAATCATAAAAACTCATCGTTCTTCACCTCACCCGAGCCACCATCACTGTTCAGGTAATTTTATTAGGCACCTTGGCGACCCAGTAGTTGTCTTCCCTGCTGTGTTGCTGCCATCAATAGTCATCAGATCAGTCATGGTGCAAGAAAGTGGCAAGAGGAAGAGGCCAAACATTCTGGTGACTGGGACACCAGGAACAGGAAAGACAACCATGTCAACTGCTCTAGCGGAAGCCACTCAGCTCCGTCACATCAATGTTGGAGAATTGGTCAAAGAGAAGAACTTGCATGATGGCTGGGATGATGAGCTTGATTGTTATGTTCTTAATGAAGACTTGGTCTGTGATGAACTTGAGGATGTTATGGAAGAGGGGGGAAACATTGTGGACTATCATGGCTGTGATTTCTTTCCCGAGCGATGGTTTGATTGTGTGGTTGTACTTCAGACTGATAACACCATTTTGTATGACCGTTTGAGCAGGAGAGGATACAACGATGCAAAGCTTTCCAACAACATTGAATGTGAAATCTTTCAAGTTCTGCTTGAGGAGGCTAAAGAAAGTTACCCGGAGGACAGAGTGGTTGCAATGAAGAGTGATACTATTGAAAACATTAGTACAAATGTTGCAACCCTGACAGATTGGGTCAGAAATTGGCTTTTACAGTCCCAGTCATAA | 3759 | 0.4366 | MADISVTKAYWARRKAQQKLEGAAKEQYGRIWDYCEEVRSKNPGSTLKLGGLNSMLGVEHFPSIPVVSKVPTIILGMDVSHGSPGQSDIPSIAAGFRFHLLPCVSATVSPDMDSFGSNGNENEDSLPPPPPVVPSDVVPVKAEPELPPEPAKKKVSRVPVARRGLGTKGMKLPLLTNHFKVNVANNDGHFFQYSVSVSYEDGRPVEGKGVGRKVIDRVQETYDSELNGKDFAYDGEKTLFTIGSLARNKLEFTVVLEDVTSNRNNGNCSPEAQGSPNESDRKRMRRPYRAKTFKVEISFAAKIPLQAISNALRGQESENYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNYADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSLDWAKAKRTLKNLRIKTSPSNQEYKITGLSELPCKEQMFTLKKKGGGNGEDVTEEEITVYDYFVNFRKIDLRYSGDLPCINVGKPKRPTYVPIELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLSDALKTSNYGSEPLLRNCGISIQSGFTQVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKRLVQPTKVERWAVANFSARCDVRGLVRDLIKCGDMKGVLIEPPFDVFEENGQFRRAPPVVRVEKMFETIQSKLPGAPQFLLCLLPERKNSDLYGPWKKKCLAEFGIVTQCISPTRVNDQYLTNVLLKINAKLGGLNSMLGVEHSPSIPVVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKQVSEKEDEGIIRELLIDFYTSSGKRKPDNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRSYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQMGQFMKFDDKSETSSSHGGVTAAGPASVPQLPKLQENVCNSINWKTPIIKTHRSSPHPSHHHCSGNFIRHLGDPVVVFPAVLLPSIVIRSVMVQESGKRKRPNILVTGTPGTGKTTMSTALAEATQLRHINVGELVKEKNLHDGWDDELDCYVLNEDLVCDELEDVMEEGGNIVDYHGCDFFPERWFDCVVVLQTDNTILYDRLSRRGYNDAKLSNNIECEIFQVLLEEAKESYPEDRVVAMKSDTIENISTNVATLTDWVRNWLLQSQS* | 1253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g00605 | 1252 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 155 | 990 | - | - | |
Rops9g00605 | 1252 | Gene3D | - | 747 | 1026 | IPR036397 | GO:0003676 | |
Rops9g00605 | 1252 | Pfam | AAA domain | 1086 | 1205 | - | - | |
Rops9g00605 | 1252 | FunFam | Protein argonaute 7 | 388 | 515 | - | - | |
Rops9g00605 | 1252 | Pfam | N-terminal domain of argonaute | 172 | 331 | IPR032474 | - | |
Rops9g00605 | 1252 | FunFam | Protein argonaute 3 | 748 | 1027 | - | - | |
Rops9g00605 | 1252 | Pfam | PAZ domain | 397 | 527 | IPR003100 | GO:0005515 | |
Rops9g00605 | 1252 | Gene3D | - | 1076 | 1250 | IPR027417 | - | |
Rops9g00605 | 1252 | SUPERFAMILY | Ribonuclease H-like | 664 | 986 | IPR012337 | - | |
Rops9g00605 | 1252 | MobiDBLite | consensus disorder prediction | 124 | 145 | - | - | |
Rops9g00605 | 1252 | Gene3D | - | 575 | 741 | - | - | |
Rops9g00605 | 1252 | ProSiteProfiles | Piwi domain profile. | 680 | 988 | IPR003165 | GO:0003676 | |
Rops9g00605 | 1252 | Gene3D | paz domain | 387 | 515 | - | - | |
Rops9g00605 | 1252 | FunFam | Adenylate kinase isoenzyme 6 homolog | 1078 | 1251 | - | - | |
Rops9g00605 | 1252 | Pfam | Piwi domain | 681 | 988 | IPR003165 | GO:0003676 | |
Rops9g00605 | 1252 | ProSiteProfiles | PAZ domain profile. | 418 | 511 | IPR003100 | GO:0005515 | |
Rops9g00605 | 1252 | SMART | DUF1785_2 | 341 | 393 | IPR014811 | - | |
Rops9g00605 | 1252 | SMART | Piwi_a_2 | 680 | 988 | IPR003165 | GO:0003676 | |
Rops9g00605 | 1252 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1082 | 1244 | IPR027417 | - | |
Rops9g00605 | 1252 | SUPERFAMILY | PAZ domain | 388 | 551 | IPR036085 | GO:0005515 | |
Rops9g00605 | 1252 | MobiDBLite | consensus disorder prediction | 263 | 286 | - | - | |
Rops9g00605 | 1252 | CDD | PAZ_argonaute_like | 393 | 510 | - | - | |
Rops9g00605 | 1252 | Pfam | Argonaute linker 2 domain | 537 | 583 | IPR032472 | - | |
Rops9g00605 | 1252 | Hamap | Putative adenylate kinase. | 1084 | 1249 | IPR020618 | GO:0004017|GO:0005524|GO:0016887 | |
Rops9g00605 | 1252 | Pfam | Argonaute linker 1 domain | 343 | 391 | IPR014811 | - | |
Rops9g00605 | 1252 | CDD | Piwi_ago-like | 555 | 980 | IPR045246 | - | |
Rops9g00605 | 1252 | MobiDBLite | consensus disorder prediction | 112 | 158 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g00605 | Rops-Chr9 | 8549185 | 8585995 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g00605 | 162 | 1020 | Eukaryotic Initiation Factors Gene Family | AT5G43810 | 35.754 | 9.12e-163 | 510 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g00605 | K11593 | - | gmx:100779439 | 1605.88 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops9g00605 | 9 | 8549185 | 8585995 | Rops9g00605 | 9 | 8549185 | 8585995 | ECH |