Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00603 ATGGTGTTGATGATAATGATAACGATGATGGGAAATCTGGCAAAATCTGAATTGCACTATGTTGGAGGGGACAAGGCTAGTTGGGCACCCAATGTTAACTTCACTGAATGGTCACTCAATGAGCACTTTCATGTGGATGACTGGCTATACTTTGGATATGATAGGCACATGTACAATGTGCTGGAGGTGAACAAGACTAGCTATGAAAACTGCATAGACACAGAATTCATTAAGAACATAACAAGGGGTGGAGGAAGAGATGTGTTTCAGCTGACAGAGGCCAAGACCTATTACTTCTTAACTGGAGGAGGTTTCTGTTGGCAAGGGATGAAGGTTGCTATAGATGTTGCTAAAAATGTTGCACCCACTCCTCAACCTGTTCATTCAAAAAATGGTTCAGCTTCATATGCTTGTGGCTTTCTCAACAACACACTTGTGGTGCTTATCTTAGTCTTGATATGGACCATCCTCTTTAAATAA 480 0.4125 MVLMIMITMMGNLAKSELHYVGGDKASWAPNVNFTEWSLNEHFHVDDWLYFGYDRHMYNVLEVNKTSYENCIDTEFIKNITRGGGRDVFQLTEAKTYYFLTGGGFCWQGMKVAIDVAKNVAPTPQPVHSKNGSASYACGFLNNTLVVLILVLIWTILFK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00603 159 FunFam Lamin-like protein 15 119 - -
Rops9g00603 159 Gene3D - 16 121 IPR008972 -
Rops9g00603 159 ProSiteProfiles Phytocyanin domain profile. 17 118 IPR003245 GO:0009055
Rops9g00603 159 SUPERFAMILY Cupredoxins 18 116 IPR008972 -
Rops9g00603 159 PANTHER BLUE COPPER PROTEIN 19 121 IPR039391 GO:0009055
Rops9g00603 159 Pfam Plastocyanin-like domain 28 110 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00603 Rops-Chr9 8542266 8544156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00603 1 158 Phytocyanin Superfamily AT2G27035 42.405 1.50e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00603 - - gmx:100812113 208.764