Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00600 ATGGGGATTCAGACAATGGGTTCTCAAAGTAATGGGCAGCAGTCTCATTTACAACCTTCTCAGTTAGCTAAACAAAGCTCATGGCATAGTCTCACTCTTGATGAGGTTAAAAGTCTACTTGGAGAGAAGGGGAAGCCATTGGGGAGCATGAACCTAGATGAGCTTCTTCAAAATGTATGGACTGCTGAAGCAAATAAAGTTGTAGGGATAGAGAATGAGCAGGTATCATCATCATCTTCTTCCCTTCAACGCCAGGCAAGTCTGACCTTGGCTTGTGCTTTAAGTGGGAAAACAGTTGATGATGTATGGAGAGAAATCCAACAAGGTAAGAAAAGATATGGAGATGATGTGAAAATTCAGGATGGAGAAATGACTCTTGGTGATACAACCTTAGAAGACTTCTTAGTACAAGCAGGGCTTTTTGCTGAAGCTTCTGTTATTCCAACTGTGGGGTTGGATGTAATGGATACCACCCCTCAATGTTTTCAACAAAAAACAGGCTTGTCACCCTCTCCTTCAATTAGCAGTTTACCGGACACTAGACCAGGTCGCAAAAGGGATGCTCCAGATGCATATGAGAAGGCTCTGGAAAGGAGGCTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCACGCTCACGAGCAAGAAAACAGGCTTACCACAATGAACTGGTTAGCAAGGTTACTCGACTAGAACAACAAAATATAAAGCTCAATAAAGAGAAGGAGTTTGAGCAGAGGCTACCACCTGAATCATCACATGAACCAAAATATCAGCTTCGAAAAATAAGTTCTGCCTTTTTCTGA 807 0.425 MGIQTMGSQSNGQQSHLQPSQLAKQSSWHSLTLDEVKSLLGEKGKPLGSMNLDELLQNVWTAEANKVVGIENEQVSSSSSSLQRQASLTLACALSGKTVDDVWREIQQGKKRYGDDVKIQDGEMTLGDTTLEDFLVQAGLFAEASVIPTVGLDVMDTTPQCFQQKTGLSPSPSISSLPDTRPGRKRDAPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVSKVTRLEQQNIKLNKEKEFEQRLPPESSHEPKYQLRKISSAFF* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00600 268 SMART brlzneu 194 266 IPR004827 GO:0003700|GO:0006355
Rops9g00600 268 MobiDBLite consensus disorder prediction 163 190 - -
Rops9g00600 268 Coils Coil 221 248 - -
Rops9g00600 268 Pfam bZIP transcription factor 198 241 IPR004827 GO:0003700|GO:0006355
Rops9g00600 268 MobiDBLite consensus disorder prediction 163 178 - -
Rops9g00600 268 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
Rops9g00600 268 MobiDBLite consensus disorder prediction 235 258 - -
Rops9g00600 268 MobiDBLite consensus disorder prediction 1 26 - -
Rops9g00600 268 CDD bZIP_plant_BZIP46 198 252 - -
Rops9g00600 268 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 196 248 - -
Rops9g00600 268 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 252 IPR043452 GO:0003700|GO:0045893
Rops9g00600 268 MobiDBLite consensus disorder prediction 235 268 - -
Rops9g00600 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 241 IPR004827 GO:0003700|GO:0006355
Rops9g00600 268 Gene3D - 196 248 - -
Rops9g00600 268 SUPERFAMILY Leucine zipper domain 198 245 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00600 Rops-Chr9 8514068 8519491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00600 22 268 bZIP Transcription Factor Family AT3G56850 43.463 1.46e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops9g00600 bZIP_1 7.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00600 K14432 - gmx:100798549 397.512