Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00585 ATGTCTCGCTCTCCTAGTACCAAAACAAACGAAGTACATCCTCCTCTTTCCTTAGCTAAAGGGTACGAAATAAAATTGATTGAACAGATTGTTCAGAAAGTCTATGATAAATTAGATTCCAAACCTTTACATGTTGGTCAAGACCCAGTTGGACTTGTGCACTGCACGGAAAAGGAGAGGTTTAAGAAAGAACAGGAAGAAAAAAAGCACGAAACGAAAGAAAGGACAGAGGCTCACCTCTATACTATTATAAAGTTGGCCCGAGATGAAGACCTTCGAGAGCAGATTGGAAATGATATAGATTATGGTCTCGTAGTCCATGACAAAGTGAAGAGTTTCCGTGTCCGAAAGCAGTTATCATTTAACCATTTCAAGGAAGAGGTTGCTAAAGAGTTTGGCATACCAGTTCAATTCCAGCGCTTTTGGCTTTGGACAAAGCGTGCAGATCATTCCTATCATCCTGATCGGCCATTGACACACGATGAGGAAGCACAATCTGTTGGACAATTGAGTTTGTTATCAAATGAGGTTCACGATGGAGAATTAAATTTGTTTTTGGAAGTGGAGCTTGGACAGGATTCACGTCCCATTGCACCACCTGACAAGACAAAGGATGATATATTGCTTTTTTTCAAGTTATATGATCCTGCAAAAAAGAAGAAGCTATGTTACATTGGAAGGGTCTTAGTGAAGAGTACTAGCAAGCCATCAGAAATCTTAAAAAGGTTAAATGAAATGGCTGGTTATGATCCTGACGAAGAGATTGAACTTTGTCAGGAAGTTTGGTTTAGTCCAAATAACCGGTGGGAGCCTATTGACATGAACTTAACATTTCATGAAAGCCAGCTACAAGATGGAGATATTGTAGGCTTTCAGAAAGCTACTCCTACGGATGATGAGGAAGATGTCAGCCATCCAGATGTGCCTTCACACACAGAATTGGAGTGCAATGGCCAGGGTGGTCCTGATGTAATGCCTGGAAATCCTTACCACCACCAACAACAGTTCATGGCTGCTACGATGAACCAACAAAAGGCAATGGGAAATGATAGATTCCTACCAATGGTTCATGCTAAGCCTCCTATGGCTGTCAATCATACAGAAAAAGAAAATACTTTGATCATGGGAAACTCTTGCAGAAAACCAGTTGCTCATGTGTCTACCACAGGAAGTACAAAGTCTCAAAGTAGGACAAAGCAGAATTCAAATTCTCCTGAACGAAAAGCTGCTTTGAAAACTTCAGCATCAAATGTTGACAAACCCATCTCCAATAGCATCAAGTCCTTCACCTTCAATGATCTAAAGGAGGCCACCAAGAACTTCCGGCCAGAAAATTTCATTGGGGAGGGAGGGTTTGGGTTTGTCTACAAGGGATGGATAGATGAGAACACTGGTGCTCCCACAAGACCAGGAACTGGGAGTGTAGTGGCCATTAAGAAGCTTAAGCAAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAAACTTATTGGTTACTGCTCAGAAGGTAAAATCAGGCTTCTAGTTTACGAGTTTCTGCAGAAAGGAAGTTTGGAAAATCACTTATTCAGAAAAGGTGTTCAACCCATTTCCTGGATTACACGGATCAATATTGCTATTGCTGTTGCAAGAGGATTAGCATTCTTACATTCCCTTGATGCAAATGTTATCTATCGTGATTTAAAGGCTTCCAATGTCCTACTTGATTCGGATTTCAATGCAAAGCTTTCAGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTCATTGGAACTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACTCCAAGGAGTGATGTGTACAGCTTTGGTGTTGTCTTGTTAGAGTTACTAACAGGAAGGCGGGTAGTTGAAGATGAGAGACCTGGATTTTCAGAAGAAACATTGGTTGATTGGGCAAGGCCCTTCTTGAGTGACAACAGAAGAATTTTGAGAATCATGGATTCAAGGTTGGGTGGTCAATACTCCAAGAAAGGAGCTCAAGCTGCAGCTGCACTTGTTCAGCAATGTTTGAATACTGATCCCAAATATAGACCACCAATGGTTAATGTTCTAGCTGCATTGGAAGCATTACAATCCTCAAATTCAATGCCAAGGACCCCAAAATCTGGAACTGAGAAACATGCAACCAAGCATTCTAGTCAATGCCAAAAGTCGGTTGGCAATACTAATAAACCTTGA 2283 0.4139 MSRSPSTKTNEVHPPLSLAKGYEIKLIEQIVQKVYDKLDSKPLHVGQDPVGLVHCTEKERFKKEQEEKKHETKERTEAHLYTIIKLARDEDLREQIGNDIDYGLVVHDKVKSFRVRKQLSFNHFKEEVAKEFGIPVQFQRFWLWTKRADHSYHPDRPLTHDEEAQSVGQLSLLSNEVHDGELNLFLEVELGQDSRPIAPPDKTKDDILLFFKLYDPAKKKKLCYIGRVLVKSTSKPSEILKRLNEMAGYDPDEEIELCQEVWFSPNNRWEPIDMNLTFHESQLQDGDIVGFQKATPTDDEEDVSHPDVPSHTELECNGQGGPDVMPGNPYHHQQQFMAATMNQQKAMGNDRFLPMVHAKPPMAVNHTEKENTLIMGNSCRKPVAHVSTTGSTKSQSRTKQNSNSPERKAALKTSASNVDKPISNSIKSFTFNDLKEATKNFRPENFIGEGGFGFVYKGWIDENTGAPTRPGTGSVVAIKKLKQESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEGKIRLLVYEFLQKGSLENHLFRKGVQPISWITRINIAIAVARGLAFLHSLDANVIYRDLKASNVLLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEDERPGFSEETLVDWARPFLSDNRRILRIMDSRLGGQYSKKGAQAAAALVQQCLNTDPKYRPPMVNVLAALEALQSSNSMPRTPKSGTEKHATKHSSQCQKSVGNTNKP* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00585 760 FunFam Ubiquitin carboxyl-terminal hydrolase 13 199 317 - -
Rops9g00585 760 Pfam ICP0-binding domain of Ubiquitin-specific protease 7 139 312 IPR024729 -
Rops9g00585 760 SUPERFAMILY Protein kinase-like (PK-like) 417 730 IPR011009 -
Rops9g00585 760 Gene3D - 199 314 - -
Rops9g00585 760 Pfam Protein kinase domain 444 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00585 760 MobiDBLite consensus disorder prediction 727 760 - -
Rops9g00585 760 FunFam Serine/threonine-protein kinase BIK1 408 526 - -
Rops9g00585 760 SMART serkin_6 441 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00585 760 CDD STKc_IRAK 447 725 - -
Rops9g00585 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Rops9g00585 760 MobiDBLite consensus disorder prediction 383 417 - -
Rops9g00585 760 PANTHER OS01G0588500 PROTEIN-RELATED 398 726 - -
Rops9g00585 760 Gene3D Phosphorylase Kinase; domain 1 415 526 - -
Rops9g00585 760 ProSitePatterns Protein kinases ATP-binding region signature. 447 480 IPR017441 GO:0005524
Rops9g00585 760 Gene3D Transferase(Phosphotransferase) domain 1 527 750 - -
Rops9g00585 760 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 527 736 - -
Rops9g00585 760 ProSiteProfiles Protein kinase domain profile. 441 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00585 Rops-Chr9 8377982 8390339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00585 419 728 Glycoside Hydrolase AT3G07070 50.949 1.02e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops9g00585 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00585 - - gmx:102664409 659.833