Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00577 ATGGAAGCAGCAGGGGCTTCAAGAAAGGTTGGTCAAGAATTGAATTGCATTGGGGCCAGTTGCTGCAAGTTGTCTTTTGTTATTATCACTGCAGCAACCTTTATTGGTGTCATTATTTCTCTCATTTTAGTGGCTAGAACCATTAAGTTTTATAAAGGTGACATATACAAGAGGTACCGGGAGCAGGTTGAAGGAGCCACGGCTGAGATGGCGGTGGTCCAATACGGCGGCGAGAGAGAACAAGAACCCAAGGTTGGGCGAGAGAGACTTTCAGCTTTCTGTCTGATGCAGAAGTTTGCTGATTTGAAATCACTGGGTACTGAATTGCAGATAATATCTGCATTTGCTGTAGATCACATGAAAGGATTTGTGTACATTGAAGCTGAAAGGCAGTGTGATATAAATGAGGCATGTCAAGGGATTTCCGGTATCTATGTTACTCGAGTGCAACCTGTTCCAAAAAGTGAAGTTTTCCATCTGTTCTCTGTACGAAGTAAAAGCATTGATATTTCTGAGGGCATGTGGGCTCGCATAAAAAGTGGTAATTACAAGGGTGACTTGGCACAGGTTGTTGCTGTGAATAATACGACCAAAAAAGTTAGTGCCCAAGATCAGCATGCTAAGACTATATTGGTTAACGATAATGTCAGGGTTCTGGAGGGTCCTTCTGAGGTCTGA 678 0.4307 MEAAGASRKVGQELNCIGASCCKLSFVIITAATFIGVIISLILVARTIKFYKGDIYKRYREQVEGATAEMAVVQYGGEREQEPKVGRERLSAFCLMQKFADLKSLGTELQIISAFAVDHMKGFVYIEAERQCDINEACQGISGIYVTRVQPVPKSEVFHLFSVRSKSIDISEGMWARIKSGNYKGDLAQVVAVNNTTKKVSAQDQHAKTILVNDNVRVLEGPSEV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00577 225 CDD NGN_Euk 84 162 IPR039385 -
Rops9g00577 225 PANTHER SUPPRESSOR OF TY 5 197 224 IPR039659 GO:0006357|GO:0032784
Rops9g00577 225 Gene3D - 172 222 IPR014722 -
Rops9g00577 225 Gene3D - 82 171 IPR036735 GO:0006355
Rops9g00577 225 Pfam Early transcription elongation factor of RNA pol II, NGN section 85 161 IPR005100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00577 Rops-Chr9 8277873 8279680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00577 2 62 Nodulin-like Gene Family AT2G39210 60.656 3.76e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00577 - - aprc:113872420 200.675