Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00567 ATGAGGAAGAAACTAGATACTCGTTTCCCTGCTGCTAGGATTAAGAAAATTATGCAAGCTGATGAGGATGTGGGGAAGATTGCAATGGCTGTGCCTCTTCTAGTTTCTAAAGCACTAGAGCTATTTCTGCAAGATTTGTGTGATCGAACATATGAGATAACATTGAGGAGGGGAGCAAAGACCATGAATGCTTTTCATTTAAAACAGTGTGTACAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGCTGCAACTGGTGACGATCATACTGTCTCTAAGAGGAGGAAAGTTCCTGAAGATGATGATAATGACAGCGATGAGGAGCCCAAGAGAAGTAAGATGCCAGAGCCTGGACATAGCAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGGGGTCGTGGACGTGGTAGTAGAACAGTAGATCAAGAGATGACTCCACAGGTCAAGTTTGAAGACGATTCTGATGTATTGAAGCAAAATGACAAGCACACTCAAAGCAATGAAAGCCTGGAAAACGTGTCAGAACATGAAGAAGTCAAGCAGAGTTTTCCAGTTTGCAAACCAGCTGAAGTGGCCATTCGAAATTTTGACTTGAATATGAACCCAGATGAGAACATGGATTCGTTAGCCATACGTACTCCTGTACCAACTAGTTCATCTCCAAAATCAATGTCAGAAGAGAAGCACGAAGAATACCCTGGATGGTCCTTGTCTGATGTGGAAAAAATGGCAATTGATCCCATTCAACTTGCCAGCCTAAATAGAAGGATTGATGAAGATGTGGAGGATTATGATGAAGAAATCTAG 840 0.4238 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSAATGDDHTVSKRRKVPEDDDNDSDEEPKRSKMPEPGHSSGRGRGRGRGRGRGRGSRTVDQEMTPQVKFEDDSDVLKQNDKHTQSNESLENVSEHEEVKQSFPVCKPAEVAIRNFDLNMNPDENMDSLAIRTPVPTSSSPKSMSEEKHEEYPGWSLSDVEKMAIDPIQLASLNRRIDEDVEDYDEEI* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00567 279 MobiDBLite consensus disorder prediction 91 192 - -
Rops9g00567 279 MobiDBLite consensus disorder prediction 156 192 - -
Rops9g00567 279 MobiDBLite consensus disorder prediction 210 246 - -
Rops9g00567 279 MobiDBLite consensus disorder prediction 99 134 - -
Rops9g00567 279 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Rops9g00567 279 FunFam dr1-associated corepressor homolog 1 86 - -
Rops9g00567 279 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Rops9g00567 279 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Rops9g00567 279 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00567 Rops-Chr9 8104899 8108912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00567 1 129 CCAAT-HAP5 Transcription Factor Family AT3G12480 71.111 9.61e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Rops9g00567 CBFD_NFYB_HMF 2.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00567 K21752 - gmx:100814800 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00567 9 8104899 8108912 Rops9g00567 9 8104899 8108912 ECH