Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00546 ATGCTTGATGTTTGCTTTAAAACGCCACCCAAGATAGCATCTGATGGCATATGGGGTGATCGAACATATGACGCATTACCTTCAAAATCAACTTTGCCAATATTTGAGCTACAAATTCTCACCATTTTCATCATCACGCAATGCTTTCATTTGGTGCTCAAGCGCCTGGGGATTCCTTATTTCGTTTCACAAATATTGACTGGCATTGTTCTAGGCCCGTCTTTCTACTTTTCAGCTGCATGGAGCAGGTTCAAAAGCTTTTTATTTCCTTATGGGAGTGAAGACATATTGAACGTAATATCAGCAATTGGCTACGCATTCTTCCTGTTTCTGAATGGTGTGCAAATGGATTTTAGCATGATAACCAGAACTGGAAAGAAAGCTTGGGCAATCGCTTTATCTTCATTCTTTATTCCCTCGATTATTGGCCTTATCGTATTCTACATGAACGCGCAGTCTTGGATAGATTTCGTTGGATTTTTTGATGCAAAAAATCTTCCTGTGATAGTGATAGGTCACAGTAGTTGTTCCTTCGCGGTGATAGCTTCTTTACTTTCTGATATTGAGATTCTGAACTCTGAACTTGGACGCCTTGCACTTTCAGCTGCTTTGGTGAGTGATGTGTTCACTTCAGTTTCAACAGGACTAGGCACTGCTATCATGAGCAGCCTCAAAACTGATTCTCATGATACAAGCGAAAGGAAGGGACCCATAATTGCTGCCATGACTGTCTCAAAATACGTGGCTTTTCTGATCCTTACTTCTGTCATTTCACGTCCTGTAATGCGCTGGTTTGTGAGAAACACTCCAGAAGGTAGACCTGTGAAGAAAATATACATCTATGCAGTAATCCTGATGACCCTTTTAGCAGGGAGGGTAGGAATGTATGCCAACCAGAGTGTGTTAGCTGGGATATTACTCCTTGGTCTTCTTGTGCCAGAAGGTCCTCCATTAGGCTCTGAATTGATTAAGCAATTTGAGTTGTTCTCCAATTGGTTCCTTTTACCACTCTTTGTCACCGGCTGTGCCATGAAGGTGAATTTTTCCTCACCCATTCATCCGCATTTGATTGCTGCTGTGGTGCCCTCCATCATTGTCGTCCATTTGCTTAAGATTCTAATAACCATGGGAATTTGTCGGCTTTGCCACATGCCCAAAACGGATGGTTTATGCCTTAGTCTCTCGTTGAGCTGCAAGGGTGTTGTGGATTTTTGCACCGCAGTGTTTCTACATGATGCAATGTTACTGAGCACGGAGGCATTAGCCCTTATGACTATATCTGTGTTGGTGTTGGGAAGCTTGGCATATATTGGAGTGAGGTTTTTGTATGACCCTTCAAGGAAATATGCAGGGTATCAAAAAAGGAATATCTTGACCTTGAAACCCAACTCAGAGCTTAGAATTGTTGCATGTATCCACAAACCAAGCCACATAATGTCCATCAAGAATGTTCTTGACATATGCTGTCCTACAACAAGCAATCCACTAGTAGTGCATGTCTTGCATCTCATGGAGCTTGTTGGAAGATCCTCTCCCATTTTCATCTCACACCGCCTTCAAGAAAGGGTTGGCTCAGGTCAGACCTACTCTGAGGATGTCATTGTTACTTTTGACCTTTTTGAACATGACAACGCAGGTACTGCAACAGTGTACACCTACACAGCTATATCTCCATTGCGCTTCATGCATGATGATATTAGCTATCTTGCATTGGACAAACTTGCATCCATTATCATTCTTCCCTTTCATATAAGATGGACAGATGATGGTTCTGTTGAATCAGTGGATGAGAACATAAGGTCTTTGAATACCAAGGTCCTGGAAAGGGCACCATGCTCTGTGGGGGTCCTTGTGAATAGGGTGCCCAATTCTTCTCAAGACACTTCTTCAAAGCAAATAGCAGTGATTTTCTTGGGGGGTGCAGATGATAGAGAAGCATTGTGCTTGGCTAAAAGATCAATCAAAGAATGTGCCAATCACTTGGTTGTGTACCACTTGGTTTCAAGCAACAATGAGGGCAAAAACTGGGACCTTATGCTTGATGATGAGGTGATAAAGGGTGTTAAGGGAGTTTATGGTAGTGTAGAAAATGTAACATATGAAAGAGTTACTGTTGAAAACCCTTCAGAGACTACTGCTTTCATCTCAGATGTAGCAAATCTACATGATTTCATTATTGTTGGGAGACGTAATGGGGTCAAATCTTCTCAAACAGCAGCACTTGAAAGTTGGACTGAGTTTCCTGAGTTGGGTGTGATTGGAGATTTGCTTGCTTCCCCAGATACTTGTAGTAAAGCTTCTATTTTAGTTGTGCAGCAACAACAAATGCCCAAGTCATGA 2340 0.4209 MLDVCFKTPPKIASDGIWGDRTYDALPSKSTLPIFELQILTIFIITQCFHLVLKRLGIPYFVSQILTGIVLGPSFYFSAAWSRFKSFLFPYGSEDILNVISAIGYAFFLFLNGVQMDFSMITRTGKKAWAIALSSFFIPSIIGLIVFYMNAQSWIDFVGFFDAKNLPVIVIGHSSCSFAVIASLLSDIEILNSELGRLALSAALVSDVFTSVSTGLGTAIMSSLKTDSHDTSERKGPIIAAMTVSKYVAFLILTSVISRPVMRWFVRNTPEGRPVKKIYIYAVILMTLLAGRVGMYANQSVLAGILLLGLLVPEGPPLGSELIKQFELFSNWFLLPLFVTGCAMKVNFSSPIHPHLIAAVVPSIIVVHLLKILITMGICRLCHMPKTDGLCLSLSLSCKGVVDFCTAVFLHDAMLLSTEALALMTISVLVLGSLAYIGVRFLYDPSRKYAGYQKRNILTLKPNSELRIVACIHKPSHIMSIKNVLDICCPTTSNPLVVHVLHLMELVGRSSPIFISHRLQERVGSGQTYSEDVIVTFDLFEHDNAGTATVYTYTAISPLRFMHDDISYLALDKLASIIILPFHIRWTDDGSVESVDENIRSLNTKVLERAPCSVGVLVNRVPNSSQDTSSKQIAVIFLGGADDREALCLAKRSIKECANHLVVYHLVSSNNEGKNWDLMLDDEVIKGVKGVYGSVENVTYERVTVENPSETTAFISDVANLHDFIIVGRRNGVKSSQTAALESWTEFPELGVIGDLLASPDTCSKASILVVQQQQMPKS* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00546 779 Gene3D - 35 450 IPR038770 -
Rops9g00546 779 Pfam Sodium/hydrogen exchanger family 42 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops9g00546 779 PANTHER CATION/H + ANTIPORTER 11 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00546 Rops-Chr9 7811696 7814510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00546 4 771 Antiporter Super Family AT3G44900 37.235 6.51e-160 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00546 K26731 - gmx:100778180 1049.65