Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00542 ATGGAACAGAGAAGAAGCTCTTCATGTCTTCTGTTCTCAATTGTTTCTTGTCTTCTGCTCCTTCTGTTTTGTTTCTCAGGATCTGCTGAGGCTTACAAGAATTATACAGTGGGAGGTTCTTTAGGTTGGTTTGATAATCTTGAGAAGCCTGGTGTCAATTACCAGAAATGGGTTGCCAATAAAGAGTTCAGCTTGGGAGATTTCCTCATTTTCAACACAGACAACAACCACTCTGTTGTTCAGACATACAATTTCACCACATACAAACTATGTGATTATGATGATGCACAAGATAAGGACACAACACAATGGTTAGCATCTGATCCATCCAATACTGAGATACATCCTGTGATAGTAGCAGTACCTTTGGTGAAGGAAGGGGTGACATACTTTTTCTCTAGTGATTATGATGGTGACCAATGCAAGAATGGACAACAATTCAAAATAAATGTGACTCATGGACAAGGGTTGCCTAAGAGTCTTAAAGATTCACCAGAAGATTCTCCATCTCCTACTAGTCCAGTTGCTGGAGATGATGATTCAGCACCAGATACAATTGTTCCTTCCAATTTCAGCCATCCCATTGAAGAGAGTGATGATGAGAAAGATAGTGACAAAGACAAACAGAAATCTAGTTCTGTTTCAATGTCAATGTATGCAAAATTTCACCACAAATTATATGGGTCTCTTATCTTGTTAGGGATATTTTTCTTGTTTTGA 720 0.3847 MEQRRSSSCLLFSIVSCLLLLLFCFSGSAEAYKNYTVGGSLGWFDNLEKPGVNYQKWVANKEFSLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDAQDKDTTQWLASDPSNTEIHPVIVAVPLVKEGVTYFFSSDYDGDQCKNGQQFKINVTHGQGLPKSLKDSPEDSPSPTSPVAGDDDSAPDTIVPSNFSHPIEESDDEKDSDKDKQKSSSVSMSMYAKFHHKLYGSLILLGIFFLF* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00542 239 ProSiteProfiles Phytocyanin domain profile. 33 153 IPR003245 GO:0009055
Rops9g00542 239 MobiDBLite consensus disorder prediction 194 210 - -
Rops9g00542 239 MobiDBLite consensus disorder prediction 155 210 - -
Rops9g00542 239 Pfam Plastocyanin-like domain 43 145 IPR003245 GO:0009055
Rops9g00542 239 PANTHER BLUE COPPER PROTEIN 32 191 IPR039391 GO:0009055
Rops9g00542 239 FunFam Early nodulin-like protein 18 32 154 - -
Rops9g00542 239 Gene3D - 32 156 IPR008972 -
Rops9g00542 239 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Rops9g00542 239 SUPERFAMILY Cupredoxins 33 151 IPR008972 -
Rops9g00542 239 CDD Phytocyanin 33 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00542 Rops-Chr9 7775334 7777319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00542 7 203 Phytocyanin Superfamily AT1G08500 61.386 2.76e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00542 - - ccaj:109789262 327.791