Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00535 ATGATTGACTATGATAGTAAAACAACATATATACTTTTCCTATTCTTACAGGGTTTCAAGAAGGTAGTTGCTGATAGGTGGGAGTTTGCAAATGAATACTTCAGAAAAGGAGCTAAGCATCTTTTATGTGAAATCCACAGGAGAAAAAACCCTCAGCACTATCAACAACACTACCATGACCAACCACCACAGTTTCTTCAGCAAGATGAAAATCTCTGTTGGATTGATAGTCCATTACCATCTCCCGAATCAGGTACTGATATCTTAACAGCACTTTCTGAAGACAATCAAAGACTGAGGAGAAAGAACTTCATGCTCTTATCAGAACTCACTCACATGAAGAATCTGTACAATGACATTATATATTTCATCCAAAACCATGTGAGCCCTGTCCCTTTTGAACAATTAAGCAGCAGTGCTATCTTAAAGCTTGTAGAATTGGATTCATCACCTAAATCACCAAATATTATGCCAGCTAAGAGTCGTATTATGGAGAAGTCTTTGATAACTTCTAGTGAGGAGTCTAATAGTTCTGTGAAGCTCTTTGGGGTCCCTCTTTGTGGAAAAAAGAGATTGCACCCAGGTAAACATTGA 594 0.3788 MIDYDSKTTYILFLFLQGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKNPQHYQQHYHDQPPQFLQQDENLCWIDSPLPSPESGTDILTALSEDNQRLRRKNFMLLSELTHMKNLYNDIIYFIQNHVSPVPFEQLSSSAILKLVELDSSPKSPNIMPAKSRIMEKSLITSSEESNSSVKLFGVPLCGKKRLHPGKH* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00535 197 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 149 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00535 Rops-Chr9 7681982 7682575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00535 8 193 HSF AT1G46264 38.819 4.32e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00535 K09419 - gmx:100776060 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00535 9 7681982 7682575 Rops9g00535 9 7681982 7682575 ECH