Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00528 ATGGGCAACTGTTGCTCAGGTGGCACTGATGACCCTGAGGACAAGGGAGAAACCAAGCAGCAAAGCAGCAATGAGAATGCAGGTGCAGAATCTGCCACCACCCCACCACCATCATCAAAGCCATCCCATCCTCCTCCTCCTTCTAAGCAACCAAAACCAGCCCCAGTTGGGCCTGTCCTTGGCAGGCCAATGGAGGATGTAAGAGCCACTTACTCCATGGGGAAGGAGCTAGGGAGAGGACAATTTGGTGTCACCCATTTGTGCACACACAAGGCAACTGGGAAGCAATATGCATGCAAAACAATAGCCAAGAGGAAGCTTGCGAACAAGGAGGACATAGAGGATGTTAGGAGGGAGGTCCAAATCATGCACCACCTCTCAGGACAGGCTAATATTGTGGAACTCATGGGTGCCTATGAGGATAAGCAATCTGTTCATTTGGTTATGGAATTGTGTGCAGGTGGTGAGCTCTTTGATCGTATCATTGCCAAGGGTCATTACACTGAACGTGCTGCAGCTTCCTTGATGAGAACCATAGTTCAGATTGTCCACACTTGTCATTCCATGGGTGTCATTCATAGAGATCTTAAGCCTGAGAATTTCCTTTTGTTGAACAAGGATGAGAATGCACCTCTCAAGGCCACCGATTTCGGTCTCTCAGTTTTCTACAAGCAAGGAGAGGTGTTTAAAGATATTGTTGGTAGTGCATATTACATTGCACCTGAGGTCTTGAAGAGGAAATATGGGCCAGAAGTAGACATTTGGAGTATTGGAGTTATGTTATACATTCTTCTATCCGGTGTTCCTCCATTCTGGGCAGAATCAGAAAATGGGATATTCAATGCCATCCTTCGAGGCCACGTTGACTTTACCAGCGATCCATGGCCCTCCATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTGAATTCGGATCCCAAGCAGAGGCTGACAGCATATGAAGTTCTGAATCATCCATGGATCAAGGAGGATGGTGAAGCACCAGATAAACCTCTTGACAATGCAGTGCTGAATAGGCTCAAACAGTTCAGAGCAATGAACCAATTCAAGAAAGTAGCTCTAAAGGTCATTGCTGGCTGCCTATCCGAGGAAGAAATCATAGGATTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGCGGAACCATTACAATTGAAGAGCTCAAGCAAGGGCTCGCAAAACAAGGAACTAAGCTGTCAGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGTAATGGAGCCATAGATTACGACGAGTTCATCACAGCTACAATGCACATGAACCGAATGAACAGAGAAGAACATCTTTATACTGCCTTCCAATACTTTGACAAAGATAACAGCGGGTATATTACCATTGAAGAACTAGAGCAAGCTCTGCATGAGTATAACATGCATGATGGCAGGGACATCAAGGAAATCATTTCAGAAGTTGATGCAGATAATGATGGCCGGATTAACTATGATGAGTTTGCTGCAATGATGAGCAAAGGAAACCCAGAAGCTTTTACCAAGAAGAGGCGTGATTCAACCTTGTACTAG 1581 0.4522 MGNCCSGGTDDPEDKGETKQQSSNENAGAESATTPPPSSKPSHPPPPSKQPKPAPVGPVLGRPMEDVRATYSMGKELGRGQFGVTHLCTHKATGKQYACKTIAKRKLANKEDIEDVRREVQIMHHLSGQANIVELMGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLMRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLSGVPPFWAESENGIFNAILRGHVDFTSDPWPSISPAAKDLVRKMLNSDPKQRLTAYEVLNHPWIKEDGEAPDKPLDNAVLNRLKQFRAMNQFKKVALKVIAGCLSEEEIIGLKQMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVKQLMEAADADGNGAIDYDEFITATMHMNRMNREEHLYTAFQYFDKDNSGYITIEELEQALHEYNMHDGRDIKEIISEVDADNDGRINYDEFAAMMSKGNPEAFTKKRRDSTLY* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00528 526 MobiDBLite consensus disorder prediction 37 58 - -
Rops9g00528 526 ProSitePatterns Protein kinases ATP-binding region signature. 77 104 IPR017441 GO:0005524
Rops9g00528 526 Pfam Protein kinase domain 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00528 526 ProSiteProfiles EF-hand calcium-binding domain profile. 483 514 IPR002048 GO:0005509
Rops9g00528 526 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Rops9g00528 526 Gene3D Phosphorylase Kinase; domain 1 73 156 - -
Rops9g00528 526 Pfam EF-hand domain pair 377 437 IPR002048 GO:0005509
Rops9g00528 526 Pfam EF-hand domain pair 446 509 IPR002048 GO:0005509
Rops9g00528 526 FunFam Calcium-dependent protein kinase 1 73 156 - -
Rops9g00528 526 SUPERFAMILY EF-hand 369 509 IPR011992 -
Rops9g00528 526 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Rops9g00528 526 ProSiteProfiles Protein kinase domain profile. 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00528 526 SUPERFAMILY Protein kinase-like (PK-like) 50 356 IPR011009 -
Rops9g00528 526 Gene3D Transferase(Phosphotransferase) domain 1 157 336 - -
Rops9g00528 526 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Rops9g00528 526 Gene3D - 337 512 - -
Rops9g00528 526 CDD STKc_CAMK 71 328 - -
Rops9g00528 526 SMART efh_1 483 511 IPR002048 GO:0005509
Rops9g00528 526 SMART efh_1 412 440 IPR002048 GO:0005509
Rops9g00528 526 SMART efh_1 376 404 IPR002048 GO:0005509
Rops9g00528 526 SMART efh_1 448 476 IPR002048 GO:0005509
Rops9g00528 526 MobiDBLite consensus disorder prediction 21 36 - -
Rops9g00528 526 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Rops9g00528 526 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 504 - -
Rops9g00528 526 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Rops9g00528 526 FunFam Calcium-dependent protein kinase 1 337 512 - -
Rops9g00528 526 MobiDBLite consensus disorder prediction 1 62 - -
Rops9g00528 526 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Rops9g00528 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Rops9g00528 526 FunFam calcium-dependent protein kinase 1 157 336 - -
Rops9g00528 526 SMART serkin_6 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00528 526 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00528 Rops-Chr9 7592253 7595336 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00528 1 525 EF-hand Containing Proteins AT5G12180 80.943 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops9g00528 Pkinase 1.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00528 K13412 - gmx:100819061 941.799