Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00527 ATGGCAATGTTGAGAGTGTGTCAGTTGAGAGTTGGAGTTTCAATTCCAAAACTCTCTTCTTCACTTTCTCCACTTCCCTCTCTCTTCTCTTTTTCTTCATCTTCTTCTCATTCCTTCGCCCACCACAGCTTCGTCCCCAGAACCTTCAATTTCCACCCACCTTCACTTCCTCTTTCACCCTTTACTTTCATCATGCCTCCCAAAGTAACAGCCTCATATAGTACTGGGAGCAGTGCTGAAGGTGGTGGTAGGGAAAGGGAAATATTGGTGCAGCATTTGTTGGTTAAAGAAGATGACCAGAAGCTACTGTTGGATCTTCAGCAGAGAATCTCTGCAGGTGAAGATTTGAGTGATCTTGCTTTGGAATATTCAATTTGCCCATCTAAAGAAGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCTTTTAGTGCTCCTTTAAACAAAGTTGTAAGGTGCAAAACAAAATTTGGATGGCACCTGCTTCAGGTTTTATCTGAAAGGGAAGAATCATTACTTATAGACATTCAACCTGATGAGCTGCATGTGAAAATTCAAGATCCCAACTTTTTGGAGGAGGCACAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTGAAGTTCTTCCCCTCCGACAATTCGGAAGCTGGGGACCTGAAATAACTACCAAATTTGACCCTCAAAAGGATACATATGTTATGTGTCATCATGGCATGCGGTCATTACAGGTTGCTAAGTGGTTGCAGTCACAGGGGTTCAGGAAAGTATACAATGTTGCTGGGGGAATCAATGCCTATGCTGTTCAGGTTGATCCATCAGTCCCCACATACTGA 882 0.4365 MAMLRVCQLRVGVSIPKLSSSLSPLPSLFSFSSSSSHSFAHHSFVPRTFNFHPPSLPLSPFTFIMPPKVTASYSTGSSAEGGGREREILVQHLLVKEDDQKLLLDLQQRISAGEDLSDLALEYSICPSKEEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQVLSEREESLLIDIQPDELHVKIQDPNFLEEAQLIDVREPEEVAKASLPGFEVLPLRQFGSWGPEITTKFDPQKDTYVMCHHGMRSLQVAKWLQSQGFRKVYNVAGGINAYAVQVDPSVPTY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00527 293 Gene3D - 81 177 IPR046357 GO:0003755
Rops9g00527 293 Gene3D - 178 290 IPR036873 -
Rops9g00527 293 Pfam PPIC-type PPIASE domain 95 175 - -
Rops9g00527 293 Pfam Rhodanese-like domain 190 283 IPR001763 -
Rops9g00527 293 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 293 - -
Rops9g00527 293 SMART rhod_4 185 288 IPR001763 -
Rops9g00527 293 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 184 291 IPR036873 -
Rops9g00527 293 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 85 175 IPR000297 GO:0003755
Rops9g00527 293 SUPERFAMILY FKBP-like 85 174 - -
Rops9g00527 293 ProSiteProfiles Rhodanese domain profile. 199 291 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00527 Rops-Chr9 7587006 7590245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00527 86 293 Sulfurtransferasese or Rhodanese AT5G19370 67.788 2.66e-104 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00527 - - aprc:113846694 454.907