Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00523 ATGGCAATGTTGAGAGTGTGTCAGTTAAGAGTTGAAGTTTCAATTCCAAAACTCTCTTTTTCACTTTCTCCACTTCCCTTTCTCTTCTCTTTTTCGTCATCTTCCTCTCACTCCTTCACCCACCACAGCTTTGTCCCCAGAATCTTCAATTTCCACCCACGTTCTCTTCCTCTTTCACCCTTTACTTTCATCATGCCTCCCAAAGTAACAGTCTCATATAGTACTGGGAGTAGTGCTGAAGGTGGTGGTAGGGAAAGGGAAATATTGGTACAACATTTGTCGGTGAAAGAAGATGACCAGAAGCTACTGTTGGATCTTCAGCAGAGAACCTCTGCAGGTGAAGATTTGAGTGATCTTGCTGTGGAACATTCAATTTGCCCATCTAAAGAAGAAGGAGGAATGCTTGGGGAAGAATCATTACTTATACACATTCAACCTGATGAGCTGCATGTGAAAATTCAAGATCCCAACTTTTTGGAGGAGACACAGTTAATTGATGTTCGAGAGTCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTGAAGTGCTTCCCCTCCGACAATTTGGAAGCTGGGGGCCTGAAATAACTACCAAATTTGACCCTCAAAAGGATACATATGTTATGTGCATATTCAATAACTTGACTTCTGAATGCAGTGTCATCATGGCATGCGGTCATTATAGGTTGCCAAGTAGTTGCAGTCACAGGGGTTCAGGAAAGTATACAATGTTGCTGGGGGGATCCATGCCTATGCTGTTCAGGTGCAGAATCTTCCACCACCCCAGTTGGGCCTGTCCTTGGCAGGCCAATGGAGGATGTGTAAGAGCCATTTACACCATTGGGAAAATGCTAGGGGAAGGAGGCTTGACTGTCATCCACGTGTGCACACACAACTCAACCGGGAAGCAATATGCATGCAAGACAATAGCCAAGAGAAAGCTTGCGAACGAGGATGACATAGAGGATGTTAGGAGGGAGGTCCAAATCTTGCATCACCTCTCAGGACAGGCTAATACTGTGGAATTCATGGGGGCTTATGAGGATAAGCAATCTGTTCATTTGGTTATGGAGTTTTGTGCAGGTGGTGATCTCTTTGATCGTATCATTGCCAATGGTCATTACACTGAACGTGCTGCAGCTTCCTTGATGAGAACCATAGTTCAGATTGTCCACACTTGTCATTCCATGGGTGTCATTCATAGAGATCTTAAGCCCGAGAATTTCCTTTTGTTGAACAAGGATGAGAATGCACCCCTCAAGGTCACCGATTTCGGTCTATCAGTTTTCTACAAGCAAGGAGAGGTGTTTAGAGATAGTCTTGGTAGTGTATATTACATTGCACCTGAGGTCTTGAAGAGGAAACATGGGCCAGAAGTAGACACTTGGAGTCTTGGAGTTATATTATATATTCTTCTATCCGATGTTCCTCCATTCTGGGCAGAATCCGAAAATGGGATATTCAATGCTATCCTACGAGGCCACGTTGACTTCACTCGCAATCCATGGCCCTCCATATCACCTGCAGCAAAAGATCTTGTAAGGAATATGTTGAATTCGGATCCCAAGTAG 1572 0.4427 MAMLRVCQLRVEVSIPKLSFSLSPLPFLFSFSSSSSHSFTHHSFVPRIFNFHPRSLPLSPFTFIMPPKVTVSYSTGSSAEGGGREREILVQHLSVKEDDQKLLLDLQQRTSAGEDLSDLAVEHSICPSKEEGGMLGEESLLIHIQPDELHVKIQDPNFLEETQLIDVRESEEVAKASLPGFEVLPLRQFGSWGPEITTKFDPQKDTYVMCIFNNLTSECSVIMACGHYRLPSSCSHRGSGKYTMLLGGSMPMLFRCRIFHHPSWACPWQANGGCVRAIYTIGKMLGEGGLTVIHVCTHNSTGKQYACKTIAKRKLANEDDIEDVRREVQILHHLSGQANTVEFMGAYEDKQSVHLVMEFCAGGDLFDRIIANGHYTERAAASLMRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKVTDFGLSVFYKQGEVFRDSLGSVYYIAPEVLKRKHGPEVDTWSLGVILYILLSDVPPFWAESENGIFNAILRGHVDFTRNPWPSISPAAKDLVRNMLNSDPK* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00523 523 Gene3D - 137 225 IPR036873 -
Rops9g00523 523 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 85 188 IPR000297 GO:0003755
Rops9g00523 523 FunFam Calcium-dependent protein kinase 1 281 364 - -
Rops9g00523 523 ProSiteProfiles Rhodanese domain profile. 158 210 IPR001763 -
Rops9g00523 523 Gene3D Transferase(Phosphotransferase) domain 1 365 523 - -
Rops9g00523 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 276 523 - -
Rops9g00523 523 Pfam Protein kinase domain 279 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00523 523 SUPERFAMILY Protein kinase-like (PK-like) 279 523 IPR011009 -
Rops9g00523 523 Gene3D Phosphorylase Kinase; domain 1 281 364 - -
Rops9g00523 523 SMART serkin_6 279 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00523 523 SUPERFAMILY FKBP-like 86 138 - -
Rops9g00523 523 CDD STKc_CAMK 279 523 - -
Rops9g00523 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Rops9g00523 523 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 142 218 IPR036873 -
Rops9g00523 523 FunFam Calcium-dependent protein kinase 5 365 523 - -
Rops9g00523 523 ProSiteProfiles Protein kinase domain profile. 279 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00523 Rops-Chr9 7551630 7556528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00523 275 523 EF-hand Containing Proteins AT5G12180 79.518 1.31e-146 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops9g00523 Pkinase 4.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00523 K13412 - gmx:100819061 431.795