Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00522 ATGACCAACAGTTGCTCAGGTGGCACTGATGACCCTAAGGACAAGGGAGAAACCAAGCAGCAAAGCAACGATGAGAATGCAGGTGGGCCTATCCTTGGCAGGCCAATGGAGGATGTAAGAGCTACTTACTCCATGGGGAAGGAGCTAGGGGATGGGCACTCTGCTGTCATCTATTTGTGCACACACAAGGCAACTGGGAAGCAATATGCATGCAAGACAATAGCCAAGAGGAAGCTTGCGAACGAGGATGACATAGAGGATGTTAGGAGGGAGGTCCAAATCATGCACCACCTCTCAGGACAGACTAATATTGTGGAACTCATGGGTGTCTATGAGGATAAGCAATCTGTTCATTTGGTTATGGAGTTGTGTGCAGGTGGTGAGCTCTTTGATCGTATCATTGCCAAGGGTCATTACACTGAACGTGCTGCAGCTTCCTTGGTGAGAACCATAGTTCAGATTGTCCACACTTGTCATTCCATGGGTGTCATTCATAGAGATCTTAAGCCTGAGAATTTCCTTTTCTTGAACAAGGATGAGAATGCACCCCTCAAGGCCACCGATTTCGGTCTCTCAGTTTTCTACAAGCAAGGAGAGGTGTTTACAGATATTGTTGGTAGTGAATATTACATTGCACCTGAGGCCTTGAAGAGGAAATATGGGCCAGAAGTAGACATTTGGAGTCTTGGAGTTATGTTATATATTCTTCTATCCGGTGTTCCTCCATTCTGGGCAGAATCTGAAAATGGGACATTCAATGCCATCCTACGAGGCCACGTTGACTTCACTAGAGATCCATGGCCATCCATATCACCTGCAGCAATAGATCTTGTAAGTAAAATGTTGAATTCGGATCCCAAGCAAAGGCTGACAGCATATGAAGTTCTGAATCATCCATGGATCAAGGAGGATGGTGAAGCACCAGATAAACCTTTTGACAATGCAGTGCTGAATAGGCTCAAACAGTTCAGAGCTATGAACCAATTCAAGAAAGTTGCTCTGAAGGTCATTGCCGGCTGCCTATCCGAGGAAGAAATTATGGGATTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGGCTAGCAAAACAAGGGACTAAGTTGTCAGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGTAATGGAACCATAGATTATGACGAGTTCATCACAGCAACTGTGCACATGAACCGAATCAACAGAGAAGAACATATTTATACTGCCTTCCAATACTTTGACAAAGATAATAGCGGGTATATTACCGTTGAAGAACTAGAGCAAGCTCTCCATGAGTATAACATGCATGATGGCAGGGACATAAAGGAAATCATTTCAGAAGTTGATACAGATAATGATGGCCGGATTAACTATGATGAGTTTGCTGCAATGATGATCAAAGGAAACCCAGAAGCTTTTACTTAG 1470 0.4401 MTNSCSGGTDDPKDKGETKQQSNDENAGGPILGRPMEDVRATYSMGKELGDGHSAVIYLCTHKATGKQYACKTIAKRKLANEDDIEDVRREVQIMHHLSGQTNIVELMGVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLVRTIVQIVHTCHSMGVIHRDLKPENFLFLNKDENAPLKATDFGLSVFYKQGEVFTDIVGSEYYIAPEALKRKYGPEVDIWSLGVMLYILLSGVPPFWAESENGTFNAILRGHVDFTRDPWPSISPAAIDLVSKMLNSDPKQRLTAYEVLNHPWIKEDGEAPDKPFDNAVLNRLKQFRAMNQFKKVALKVIAGCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVKQLMEAADADGNGTIDYDEFITATVHMNRINREEHIYTAFQYFDKDNSGYITVEELEQALHEYNMHDGRDIKEIISEVDTDNDGRINYDEFAAMMIKGNPEAFT* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00522 489 ProSiteProfiles Protein kinase domain profile. 43 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00522 489 FunFam Calcium-dependent protein kinase 1 309 484 - -
Rops9g00522 489 ProSiteProfiles EF-hand calcium-binding domain profile. 344 379 IPR002048 GO:0005509
Rops9g00522 489 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Rops9g00522 489 Pfam EF-hand domain pair 349 409 IPR002048 GO:0005509
Rops9g00522 489 Pfam EF-hand domain pair 418 480 IPR002048 GO:0005509
Rops9g00522 489 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Rops9g00522 489 Gene3D - 342 410 - -
Rops9g00522 489 Gene3D Transferase(Phosphotransferase) domain 1 129 319 - -
Rops9g00522 489 Gene3D Phosphorylase Kinase; domain 1 45 128 - -
Rops9g00522 489 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
Rops9g00522 489 ProSitePatterns EF-hand calcium-binding domain. 357 369 IPR018247 -
Rops9g00522 489 SMART serkin_6 43 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00522 489 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Rops9g00522 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Rops9g00522 489 ProSiteProfiles EF-hand calcium-binding domain profile. 455 486 IPR002048 GO:0005509
Rops9g00522 489 Pfam Protein kinase domain 43 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00522 489 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Rops9g00522 489 FunFam calcium-dependent protein kinase 1 129 308 - -
Rops9g00522 489 SUPERFAMILY EF-hand 341 481 IPR011992 -
Rops9g00522 489 SUPERFAMILY Protein kinase-like (PK-like) 33 327 IPR011009 -
Rops9g00522 489 CDD STKc_CAMK 43 300 - -
Rops9g00522 489 Gene3D - 320 480 - -
Rops9g00522 489 SMART efh_1 384 412 IPR002048 GO:0005509
Rops9g00522 489 SMART efh_1 455 483 IPR002048 GO:0005509
Rops9g00522 489 SMART efh_1 348 376 IPR002048 GO:0005509
Rops9g00522 489 SMART efh_1 420 448 IPR002048 GO:0005509
Rops9g00522 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 476 - -
Rops9g00522 489 ProSitePatterns Protein kinases ATP-binding region signature. 49 76 IPR017441 GO:0005524
Rops9g00522 489 FunFam Calcium-dependent protein kinase 1 45 128 - -
Rops9g00522 489 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00522 Rops-Chr9 7537966 7541643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00522 29 486 EF-hand Containing Proteins AT5G12180 84.279 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops9g00522 Pkinase 2.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00522 K13412 - gmx:100820422 853.973