Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00508 ATGGCAGACAATGGGCGTGTACCCTCTCTCTCCCCAGCCTCAGAGAATGACTCCTCGGAGCACAGTCCAAGGAGTTTCGCCACACTCTCTGGCGGCTCCTCCGTTATGGGAGGTGCTAGTAGAGGGTACATCACCCTCTCTAACAAAAACTACAAACTTGTCCCAACTGCACCATCACCATCATTACCACCACCCTCCTCCGTCAACGGTGGAGAGGAGAACCTCACCACTCCACCCTCCAGCAACAAGAGACCAAGGGGAAGACCCCCTGGTTCCAAAAACAAGCCCAAACCACCCATTTTCATAAGGGAAGATAACGATCAACTTCTCAAACCAATCATCATTGAAATCCCTTCTGGAAATGACATCATTGAGTCCATCATCGCCTTTGCTCGTCACCGTCGTGTCTGCATCTCGGTGCTTAGTGGTTCTGGCTCAATCTCTGATGTGACACTTCGCCACCCTTTGTCACGTGCTCCTGTTTTCCCTGTCCAGGGAAGCTTCAACTTGCTCTCTCTCACCGGCACTTACACAACTGGCCGTTTTCCTTCTCTCTCCACTGACCCTCCTTGTTCCTCCTTTGGGATTTCCCTCTGTGGAAGCCAGGGTCAGGTGTTTGGTGGGATTATTGGAGGGAAGGTTATAGCTTCAGGTGTTGTGGTGGTTGTGGCCTCCATTTTCAAGAACCCTGAACATCACAGGTCGCCATTCATGCATGCAAGTGTTGTGGAATCTGAGGAGAATAATCACATGTATGCTGGTGTAATCAATGCTAATGCTGGTGGTGATCCAAGTGCTAATAATAACAACAATAATAATAATAATATGCCTATGTCTATGTCCATGTCTGCTTTTGGTGTTGCAGTTAATAGTTCAACTTCACTCAATGGTCATATCCCTTCTGCTGCTGCCGATGTGAATCTCATTCAGTGGAATCACCCTGCTCCTCATCATCAGTTTAATTAA 966 0.4814 MADNGRVPSLSPASENDSSEHSPRSFATLSGGSSVMGGASRGYITLSNKNYKLVPTAPSPSLPPPSSVNGGEENLTTPPSSNKRPRGRPPGSKNKPKPPIFIREDNDQLLKPIIIEIPSGNDIIESIIAFARHRRVCISVLSGSGSISDVTLRHPLSRAPVFPVQGSFNLLSLTGTYTTGRFPSLSTDPPCSSFGISLCGSQGQVFGGIIGGKVIASGVVVVVASIFKNPEHHRSPFMHASVVESEENNHMYAGVINANAGGDPSANNNNNNNNNMPMSMSMSAFGVAVNSSTSLNGHIPSAAADVNLIQWNHPAPHHQFN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00508 321 ProSiteProfiles PPC domain profile profile. 107 250 IPR005175 -
Rops9g00508 321 MobiDBLite consensus disorder prediction 9 41 - -
Rops9g00508 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 73 274 IPR014476 GO:0003680
Rops9g00508 321 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 236 - -
Rops9g00508 321 MobiDBLite consensus disorder prediction 66 82 - -
Rops9g00508 321 Gene3D - 110 253 - -
Rops9g00508 321 MobiDBLite consensus disorder prediction 1 41 - -
Rops9g00508 321 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 228 IPR005175 -
Rops9g00508 321 CDD DUF296 111 212 IPR005175 -
Rops9g00508 321 MobiDBLite consensus disorder prediction 53 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00508 Rops-Chr9 7311854 7312819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00508 83 250 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 46.199 4.04e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00508 - - lang:109328424 249.21