Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00494 ATGAGCACTCCTACTTTCAGTTTTGTACTATTTGGCCTATTCCTTTTGTGCCTCACTTGTACTGCTTCCGTTTCCTCACTTCATATGTCTCTAAGAAGGCAAGCTTCTATCTTGGTTTCTCTCAAACAAGATTTTGAAGCCAACAGTTCTTCTTTGAACAGTTGGGACATATCTAACTACATGTCCCTTTGCACTTGGGATGGCATTCAGTGTGACCAAAAGAACAAGTCTGTAGTGTCACTAGATATATCCAACTTGAACATTTCTGGGACACTTTCACTTGCCATCACAGGACTCAGGAGTCTTGTGAGTGTTTCAGTTGCAGGCAATGGCTTGTCTGGGGAGTTCCCAGCTGATATTCACAAGCTAACAGGGTTGAGATTCCTCAACATATCCAACAATATGTTTAGTGGAAATGTGAGTTGGGAATTCTTCAAGTTGAAAGAGCTTGAAATGTTGGATGCTTATAACAATGAGTTCAATTGCTCCCTCCCACTTGGTGTCATTGAGCCCCCTAAGCTCAAACACTTGAATTTTGGTGGGAATTATTTCTCTGGAGAAATCCCTCCAAGCTATGGAAACATGGTGCAGCTTAATTATTTGTCTCTTGCAGGAAATGATTTGGGAGGTTTTATACCATCTGAGCTTGGAAACCTCACTAATCTGACTCAGCTTTTCTTGGGATATTATAACCAATTTGATGGTGGAATCCCACCTCAGTTTGGTAAGCTAATCAATTTAGCTCATCTTGACCTTGCAAACTGTGGCTTGAAAGGTCCAATTCCATATGAGTTGGGCAACCTTTATAAACTAGACACTCTCTTTTTGCAAACTAATCAGCTCACTGGTTCAATCCCTCCCCAACTAGGTAATCTGAGTAGCTTGAAATCGCTTGATATATCAAACAATGAGCTGATAGGAAACATCCCAAATGAGTTCTCTGGCCTTCATGAGCTTACCCTCTTGAACTTATTCATTAATAGGTTACATGGAGAAATTCCATCTTTCATTGCTGAGCTACCTAAGTTGGAAGTGTTGAAGCTTTGGCATAACAACTTCACAGGAGCTATTCCTTCAAAGCTTGGCCAGAATGGTAAATTGACTGAGCTTGACTTGTCAACAAATAAGCTCACTGGATTAGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTGAAGATTTTGATCTTGCTCAATAATTTTCTGTTTGGATCTTTGCCTGCTGATCTTGGTCAATGCTACACACTCCAAAGAGTTCGTTTGGGACATAACTATTTGACTGGATCAATACCAAATGGATTTCTTTATTTGCCTGAGCTCTCCCTTCTGGAACTACAGAACAATTATCTTAGTGGTTGGCTTCCACGAGAAACAAGCACTGCACCCTCTAAACTTGGACTGTTGAATCTATCAAACAATCGCTTATCCGGGTCTCTACCAACCTCTATTGGAAACTTTTCCAACTTGCAAATTCTGTTGCTCCATGGAAATAGATTCTCAGGAGAAATCCCTTCAGATATTGGGAGGCTGAAAAATATTATCAAGTTGGATATGAGTGTCAACAACTTTTCAGGCAGTATTCCTCCTGAGATTGGTAATTGTTTCTTGCTCACTTACTTAGATTTGAGCCAGAACCAACTATCAGGCCCGATCCCAGTTCAGGTTTCTCAAATTCATGTACTAAACTATCTTAATGTCTCATGGAACCACCTAAACCAAAGTCTTCCTGAGGAACTTGGGGCCATGAGGGGCTTAACTTCAGCAGATTTCTCTCATAATAACTTCTCTGGTTCAATTCCTGAGGTAGGACAATTCTCATTTTTTAATTCTACATCCTTTGTGGGTAATCCTCAGCTTTGTGGATATGACTTGAAACCATGCAGCCATTCTTCAGTGACAATATTGGAGTCTCAGGACAAAGGCAGTGCAAAACCTGGAGTTCTACGGAAGTATAAGCTTCTATTTGCATTGGCACTGTTAGGTTGTTCATTGGTGTTTGCAACCTTTGCCATTATCAAGAGCAGAAAGGGAAGAAGGCACTCAAATTCATGGAAGATCACAGCATTTCAGAAGCTGGAATATGGAAGTGAAGACATCTTAGGATGTATAAAGGAAAGCAATATCATAGGAAGGGGAGGAGCTGGGGTTGTATATGGAGGAACCATGCCAAATGGAGAGCAAGTAGCAGTGAAGAAGCTATTAGGAATCAACAAAGGTTGTTCTCATGATAATGGCCTCTCTGCAGAAATAAAGACACTAGGTAGAATCAGGCACAGGTACATTGTAAGGTTGCTGGCATTTTGTTCAAATAGAGAGACCAATTTACTTGTTTATGAGTACATGCCAAATGGAAGCTTAGGTGAAGTCTTGCATGGAAAAAGGGGTGAGTTTCTCAAGTGGGATACCAGGCTGAAAATAGCAAGAGAAGCTGCAAAAGGACTTTGTTATTTGCACCATGATTGTTCCCCTCTGATAATCCACAGAGATGTCAAATCAAACAACATATTGTTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGATACTGGGACATCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGTTATATAGCTCCAGAATATGCATACACACTGAAAGTTGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTCTTAACTGGGAGAAGGCCTGTGGGGGATTTTGGGGAAGAAGGACTAGATATTGTTCAATGGACCAAGCTGCAAACCAATTGGAACAAAGAGAGAGTGGTGAAGATCCTTGATAAGAGGCTATGTGACATTCCCTTAGATGAAGCAAAGCAGTTATTCTTTGTGGCCATGTTATGTGTTCAGGAACAAAGTGTGGAGAGACCAACCATGAGGGAAGTGGTCGAAATGCTGGCACAAGCAAAGGAACCAAATACGTTTTGGTCTTTGACCGGGAATCCCTCATGA 2976 0.4116 MSTPTFSFVLFGLFLLCLTCTASVSSLHMSLRRQASILVSLKQDFEANSSSLNSWDISNYMSLCTWDGIQCDQKNKSVVSLDISNLNISGTLSLAITGLRSLVSVSVAGNGLSGEFPADIHKLTGLRFLNISNNMFSGNVSWEFFKLKELEMLDAYNNEFNCSLPLGVIEPPKLKHLNFGGNYFSGEIPPSYGNMVQLNYLSLAGNDLGGFIPSELGNLTNLTQLFLGYYNQFDGGIPPQFGKLINLAHLDLANCGLKGPIPYELGNLYKLDTLFLQTNQLTGSIPPQLGNLSSLKSLDISNNELIGNIPNEFSGLHELTLLNLFINRLHGEIPSFIAELPKLEVLKLWHNNFTGAIPSKLGQNGKLTELDLSTNKLTGLVPKSLCLGKRLKILILLNNFLFGSLPADLGQCYTLQRVRLGHNYLTGSIPNGFLYLPELSLLELQNNYLSGWLPRETSTAPSKLGLLNLSNNRLSGSLPTSIGNFSNLQILLLHGNRFSGEIPSDIGRLKNIIKLDMSVNNFSGSIPPEIGNCFLLTYLDLSQNQLSGPIPVQVSQIHVLNYLNVSWNHLNQSLPEELGAMRGLTSADFSHNNFSGSIPEVGQFSFFNSTSFVGNPQLCGYDLKPCSHSSVTILESQDKGSAKPGVLRKYKLLFALALLGCSLVFATFAIIKSRKGRRHSNSWKITAFQKLEYGSEDILGCIKESNIIGRGGAGVVYGGTMPNGEQVAVKKLLGINKGCSHDNGLSAEIKTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIAREAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLDIVQWTKLQTNWNKERVVKILDKRLCDIPLDEAKQLFFVAMLCVQEQSVERPTMREVVEMLAQAKEPNTFWSLTGNPS* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00494 991 Gene3D Transferase(Phosphotransferase) domain 1 780 984 - -
Rops9g00494 991 Pfam Protein kinase domain 704 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00494 991 Gene3D Ribonuclease Inhibitor 366 630 IPR032675 -
Rops9g00494 991 Gene3D Phosphorylase Kinase; domain 1 677 779 - -
Rops9g00494 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 344 630 - -
Rops9g00494 991 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Rops9g00494 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Rops9g00494 991 SUPERFAMILY L domain-like 308 632 - -
Rops9g00494 991 Pfam Leucine rich repeat 270 329 IPR001611 GO:0005515
Rops9g00494 991 SMART serkin_6 702 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00494 991 ProSiteProfiles Leucine-rich repeat profile. 366 387 IPR001611 GO:0005515
Rops9g00494 991 Gene3D Ribonuclease Inhibitor 289 365 IPR032675 -
Rops9g00494 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 144 231 - -
Rops9g00494 991 SUPERFAMILY L domain-like 44 382 - -
Rops9g00494 991 ProSiteProfiles Protein kinase domain profile. 702 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00494 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 671 779 - -
Rops9g00494 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 780 988 - -
Rops9g00494 991 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Rops9g00494 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 232 337 - -
Rops9g00494 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 197 976 - -
Rops9g00494 991 SMART LRR_typ_2 485 509 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 340 364 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 365 387 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 436 460 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 195 219 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 557 581 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 268 291 IPR003591 -
Rops9g00494 991 SMART LRR_typ_2 292 315 IPR003591 -
Rops9g00494 991 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Rops9g00494 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 33 143 - -
Rops9g00494 991 SUPERFAMILY Protein kinase-like (PK-like) 696 974 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00494 Rops-Chr9 7048632 7052518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00494 31 976 Receptor kinase-like Gene Family AT5G65700 58.588 0.0 1101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops9g00494 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00494 - - gmx:100816158 1668.67