Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00463 ATGGTTGTTGCAGCTGCTGCTAGTGTTGATGGTAAAGAAAAGGTTATTGCCAAGATGGGTGTGGTGGTTGATGGAAGGAAGAGGCTTTGCAACGGTGACAAGAACAAGGAACCAATAATGAGTTCATATTTCGACAACGTGATTTCCATTCCTTACGGTGGGAAAGAAGCGGAGGAGCTGGTCGAAAAGCCGTTAAGCTGGGTGGCGGAGCAAGTTAATGAGTTTTTAGAGACGGTAGTGACGAAGGAACATTTCTTAGGGCTGATTGGTTGGGCGGAAGCTCACCGTCCAGTGCCAGGGTTGGCTAGGATTTATTGCGGTGGCACTGGGGACAAGGGACCGGGTTTCGTGGTATCATCGTGGCAAAGGTTTCTAGCGACGAAGGTGAACTTTGGGTGGGGGAAGCCTGTGTTTGCGTCGTACCATTTTCCTTGGCCAATACCTAGTCCTAAAGGCGATGGTGACTGGCTTCTCTACATGCACCTTCCAAAAACCCACTTGCTCTTCATGGAGTCTCGAGCTCCTCATTTCTTTAAGCCCTTCTCTTGGGATTATCTCCTCAATCAACATTGA 573 0.4887 MVVAAAASVDGKEKVIAKMGVVVDGRKRLCNGDKNKEPIMSSYFDNVISIPYGGKEAEELVEKPLSWVAEQVNEFLETVVTKEHFLGLIGWAEAHRPVPGLARIYCGGTGDKGPGFVVSSWQRFLATKVNFGWGKPVFASYHFPWPIPSPKGDGDWLLYMHLPKTHLLFMESRAPHFFKPFSWDYLLNQH* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00463 190 Gene3D - 1 172 IPR023213 -
Rops9g00463 190 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 166 - -
Rops9g00463 190 Pfam Transferase family 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00463 Rops-Chr9 6559513 6560085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00463 17 171 Monolignol Biosynthesis Gene Families AT5G48930 26.087 1.12e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00463 - - gmx:100817652 278.485