Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00462 ATGTGTATTGGCAAAGAAGAATTCAGTGTGAGGGTTACCAAGGAAGAGGTGGTGGCGGCAGTGCTATCCATGCAAGAGCACTGGCTGCCACTCTCTAACCTTGATTTACTTCTTCCCCCAGTGGACGTTGGAGTATTCTTTTGCTATAAGAACCCTATGCCAGTATCCTTCTCAAACACCAAAAACAGCACAATGAGTTTTGCATCCATGGTGGGGTCTCTGAAAAAAGCCTTAGCTCAGGCTCTACTTTCTTATTACCCATTTGCTGGTGAAGTGGTGCTCAACTCAATGGGTGAACCTGAGCTACTTTGCAATAACCGTGGTGTAGATTTTGTTGAAGCTGTGGCTGAAGTTGAGCTACACTCCCTCAATCTCTACAACCCAGATGACTCAGTTGAAGGGAAGCTTGTTCCTAGGAAGAAGCACGGCGTGCTTGCTGTTCAGGCAACTTGGCTAAAGTGTGGTGGGTTGGTAGTGGCATGCAGTTTTGACCATCGCATAGCTGATGCCTACTCTGCAAACATGTTCTTCGTATCATGGGCTGAGATGGCCCAGCCCAACCGGCCCACAGTTTCCACAAAGCCCTGTTTCCGGCGCTCCCTTCTCATCCCACGACGCCCACCTTCCATCCACCCTTCACTCCATGACATGTACGTCCCCATCTCGAACCTCCCTCCCCAACCCGAACCCGAATGTGGATCCGGATCCGACCCACTCATCAGCCGCATATACTACGTGACATGTGAACAACTCAACCTCATGCAGTCACTGGCTAGCTCAAACGGTGCAAAACGCACAAAGCTGGAATCCTTCTCCGCATTCCTATGGAAGATGGTTGCCGCAGCTGCTGCCAGTGATGATGGGAAAGAGAATATTATTGCCAAGATGGGTGTGGTGGTTGATGGAAGGAAGAGGCTTTGCAACGGTGACAAGAACAAGGAAGCAATCATGAGTTCATATTTTGGCAACGTGGTTTCCATTCCTTACGGTGGGAAAGAAGTGGAGGAGCTGGTAGAAAAGCCTTTAAGCTGGGTGGTGGAGCAAGTTCATGAGTTTTTAGAGACGGCGGTGACGGAGGAACATTTCTTGGGGCTGATTGATTGGGTGGAAGAACACCGCCCAGTGCCAGGGTTGGCTAGGATTTATTGCGGTGGGGAAAAGGGACCAGCTTTAGTGGTATCTTCTGGGCAAAGGTTTCCGGCGACGAAGGTGGACTTTGGGTGGGGGAAGCCTGCGTTTGCGTCGTACCATTTTCCTTGGGGTGGAGATGCTGGTTATGTAATGCCGATGCCAAGTCCTAAAGGCAATGGTGACTGGCTCCTTTACATGCACCTTCCAAAGACACATTTGCTCTTCATTGAGTCTCAGGCTCCCCATTTCTTTAGGCCCTTCTCTTGGGATTACCTCCTCAATCAACATTGA 1422 0.5 MCIGKEEFSVRVTKEEVVAAVLSMQEHWLPLSNLDLLLPPVDVGVFFCYKNPMPVSFSNTKNSTMSFASMVGSLKKALAQALLSYYPFAGEVVLNSMGEPELLCNNRGVDFVEAVAEVELHSLNLYNPDDSVEGKLVPRKKHGVLAVQATWLKCGGLVVACSFDHRIADAYSANMFFVSWAEMAQPNRPTVSTKPCFRRSLLIPRRPPSIHPSLHDMYVPISNLPPQPEPECGSGSDPLISRIYYVTCEQLNLMQSLASSNGAKRTKLESFSAFLWKMVAAAAASDDGKENIIAKMGVVVDGRKRLCNGDKNKEAIMSSYFGNVVSIPYGGKEVEELVEKPLSWVVEQVHEFLETAVTEEHFLGLIDWVEEHRPVPGLARIYCGGEKGPALVVSSGQRFPATKVDFGWGKPAFASYHFPWGGDAGYVMPMPSPKGNGDWLLYMHLPKTHLLFIESQAPHFFRPFSWDYLLNQH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00462 473 Gene3D - 226 455 IPR023213 -
Rops9g00462 473 Pfam Transferase family 9 457 - -
Rops9g00462 473 Gene3D - 7 220 IPR023213 -
Rops9g00462 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00462 Rops-Chr9 6546535 6548381 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00462 32 454 Monolignol Biosynthesis Gene Families AT5G48930 26.606 1.09e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00462 - - gmx:100809201 686.026