Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00461 ATGGATACAATCATGGAAGACTCATTTGTTGATTTAAAAGATGATGGTGATTTGAATATGATACATTCCAGTGGTTCGAAGGAGTCAGCAGTGAAAGATTATGAAAATGGGGAAGACAATGATGATGTTTATAAGAGAGTAACCGAGTTGACCCGTGATGACATCTTACATTTACAGTTTGATAGTGAAAAAGAAGCTATAGAATTTTACAACAAATATGCAATGTACCAGGGATTTGTTGTGAGGAAAGATGATGTAACTAGGGATGTTAAGGGTAAGGTTGTGATGCGCCAATTAGTGTGCAACAGAGCTGGTTTGAGGAACAAAAAACATTATGAAAGGGTGGACAGAATAAGAGAGCATAGACCAATTACACGAACAAACTGTCCAGCTAAGTTGAAGGTCCATTTTGACTACCGAACATTGAAGTGGAGGGTCGCATTGTTTGAGGATAGACATAACCATGTTCTTACACCAACAGAACATGTTCACCTACTAACTGGTTATCGTAGGTTGACATATGCAGATGAAGCTCAAGTGGACAGCTTGCATCTCTATGGTGTAAGGACATGCCATATAATGGGTTTCATGTTAGCACAGAAAGGTGGATATTCGGACCTAGGATTCTGCAAGAAGGATCTCTACAATCATCTTGATAAATAG 663 0.3876 MDTIMEDSFVDLKDDGDLNMIHSSGSKESAVKDYENGEDNDDVYKRVTELTRDDILHLQFDSEKEAIEFYNKYAMYQGFVVRKDDVTRDVKGKVVMRQLVCNRAGLRNKKHYERVDRIREHRPITRTNCPAKLKVHFDYRTLKWRVALFEDRHNHVLTPTEHVHLLTGYRRLTYADEAQVDSLHLYGVRTCHIMGFMLAQKGGYSDLGFCKKDLYNHLDK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00461 220 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
Rops9g00461 220 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00461 Rops-Chr9 6518433 6519095 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops9g00461 FAR1 4.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00461 - - ccaj:109792835 249.21