Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00457 ATGTGTATTGGCAAAAGAGAATTCAGTGTGAGGGTGACCAAGGAGGAGGTGGTGGCGGCAGTGCTGCCAATGCAAGAGCACTGGCTGCCACTCTCTAACCTTGATCTAATTCTTCCCCCAGTGGACGTTGGCGTATTCTTTTGCTATAAGAACCCTATGCCAGTGTCCTTCTCAAACACCAACAAAAGCACAATGAGCTTTGGATCCATGGTGGGGTCTCTGAAAAAAGCCTTAGCTCAGGCTCTGGTTTCCTATTACCCTTTTGCTGGTGAAGTGGTACTCAACTCAATGGGTGAACCTGAGCTACTTTGCAATAACCGTGGTGTAGATTTCGTTGAAGCTGCGGCTGATGTTGAGCTACACTCCCTCAATCTCTACAACCCAGATGACTCCGTTGAAGGGAAGCTTGTTCCTAGGAAGAAGCACGGCGTGCTTGCTGTTCAGGCAACTTGGCTAAAGTGCGGTGGGTTAGTAGTGGCATGCAGTTTTGACCATCGCATAGCTGATGCCTATTCTGCAAACATGTTCTTCGTATCATGGGCTGAGATGGCCCAGCCCAACCGGTCCACAGTTTCCACAAAGCCCTGTTTCCGGCGCTCCCTTCTCATTCCACGACGTCCACCTTCCATCCACCCTTCACTCCATGACATGTACGTCCCCATCTCGGACCTCCCTCCCCCACCTGAACCCAAATGTGGATCGGGATCCGACCCACTCATCAGCCGCATATACTACGTGACATGTGAACAACTCAACCACATGCAGTCACTGGCTAGCTCAAACGGTGCAAAACGCACAAAGCTGGAATCCTTCTCTGCATTCCTATGGAAGATGGTTGCCACTGCTGCTGCCAGTGATGATGGGAAAGAGAAGGTTATTGCCAAGATGGGTTTGGTGGTTGATGGTAGGAAGAGGCTTTGCAACGGTGACAAGAACAAGGAAGCAATAATGAGTTCATATTTTGGCAACGTGGTTTCCATTCCTTACGGTGGGGAAGAAGCGGAGGAGCTGGTAGAAAAGCCGTTAAGCTGGGTGGCGGAGCAAGTTCATGAGTTTTTAGAGACGGCGGTGACGGAGGAACATTTCTTGGGGCTGATTGATTGGGTGGAAGAACACCGCCCAGTGCCAGGGTTGGCTAGGATTTATTGTGGTGGCACTGGGGAAAAGGGACCAGCTTTCGTGGTATCTTCAGGGCAAAGGTTTCCGGCGACGAAGGTGGATTTTGGGTGGGGGAAGCCAGAGTTTGCTTCATACCATTTTCCTTGGGGTGGAGATGCTGGCTATGTAATGCCAATGCCTAGTCCTAAAGGCAATGGTGACTGGCTTCTCTACATGCACCTTCCAATGACCCACTTGCTCTTCATGGAGTCTCGAGCTCCCCATTTCTTTAGGCCCTTCTCTTGGGATTACCTCCTCAATTAA 1422 0.5056 MCIGKREFSVRVTKEEVVAAVLPMQEHWLPLSNLDLILPPVDVGVFFCYKNPMPVSFSNTNKSTMSFGSMVGSLKKALAQALVSYYPFAGEVVLNSMGEPELLCNNRGVDFVEAAADVELHSLNLYNPDDSVEGKLVPRKKHGVLAVQATWLKCGGLVVACSFDHRIADAYSANMFFVSWAEMAQPNRSTVSTKPCFRRSLLIPRRPPSIHPSLHDMYVPISDLPPPPEPKCGSGSDPLISRIYYVTCEQLNHMQSLASSNGAKRTKLESFSAFLWKMVATAAASDDGKEKVIAKMGLVVDGRKRLCNGDKNKEAIMSSYFGNVVSIPYGGEEAEELVEKPLSWVAEQVHEFLETAVTEEHFLGLIDWVEEHRPVPGLARIYCGGTGEKGPAFVVSSGQRFPATKVDFGWGKPEFASYHFPWGGDAGYVMPMPSPKGNGDWLLYMHLPMTHLLFMESRAPHFFRPFSWDYLLN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00457 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 434 - -
Rops9g00457 473 Pfam Transferase family 9 458 - -
Rops9g00457 473 Gene3D - 227 457 IPR023213 -
Rops9g00457 473 Gene3D - 7 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00457 Rops-Chr9 6450670 6452952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00457 7 456 Monolignol Biosynthesis Gene Families AT5G48930 27.332 2.47e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00457 - - gmx:100809201 723.391