Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00426 ATGCAAGAGCCCCTTCTGAACCTTTTCCCTAGGAAAGGAAAAGAAGCACAATCACCAAGCACAACATCATCCAAGGAACAATCTGTCCATGATCTTGCTCTTGCCCCATCATTGCCTCCATCAAGTTCTCCTCATATCATCAATGAAGCCAAGAGCCCTTCTTATATTAACCTTATATCCAACTTGAGCTTAAGGAAAAGGAAGATTACTCATCGTTCCCGCTCTGCTCCATCCTTATTATTCACTGACATGAGGGTAGATTTTCATGAGCCATCTGAACCCAGAGCTGCACCTAAGTCTTCAACTTTAATAGTGAGGCTATCTTTCATTGGTGTTTTCTTGTATGTGGCAACTGGGGTTACAGTGTACCTGACAAGTGACAGTTTCAAGGGCATTACCACATTCAAGCCAGTAGATGCAGTGTACTTTACAGTGGTAACTCTCTGCACTATTGGATATGGAGATATTGTTCCTGACACCATATTTACCAAGATGTTTACCTGTGGTTTCATTTTGGTGGGTTTTGGATTTATTGGTTTTCTGCTCAATGAGTTGGTTGCATACATTTGTGATACACATGAGGCATTCTTATTGAGCATGATGGATGAGAAACGATATAAGAAAATTCTGAGGACTTATATGGTTGATGAAGAGAAAGGAAGGATGAGGATAAGAACCAAAGTTTGTCTTGCTTTGGCTGTTGTCATTGGCTGCATTGCTATAGGAACAGTTACAGCTCACTTTGTAGAGAATCTGAATTGGACTGACAGTTTATATCTCTCTATTACTTCTGTTACAACAGTTGGTTATGGGGATTATTCTTTCAGAACTGTAACTGGAAGATGTTTTGCAAGTCTATGGCTTTTGGTAAGCACATTGGCAGTTGCCAGGGCTTTTCTATACCTCACTGATTATAGCATGCACAAGAGAAACCGTGAGATGGCAAAATGGGTTCTTAAAAAGAAGATAACCTTATCAGATTTAGCGGCTGCAGATCTTGATCATGATGGATCAATCAGTAAGTCTGAATTTGTCATATACAAGCTTAAGCAAATGGGGAAGATTACCGAGATAGACATTCTGCAAATAAGTAAACAGTTTGATTCCTTGGATCATGGCATGTATGGCAAGATTACTCTAGCTGACCTCATGGGATCTGTTTAA 1164 0.3995 MQEPLLNLFPRKGKEAQSPSTTSSKEQSVHDLALAPSLPPSSSPHIINEAKSPSYINLISNLSLRKRKITHRSRSAPSLLFTDMRVDFHEPSEPRAAPKSSTLIVRLSFIGVFLYVATGVTVYLTSDSFKGITTFKPVDAVYFTVVTLCTIGYGDIVPDTIFTKMFTCGFILVGFGFIGFLLNELVAYICDTHEAFLLSMMDEKRYKKILRTYMVDEEKGRMRIRTKVCLALAVVIGCIAIGTVTAHFVENLNWTDSLYLSITSVTTVGYGDYSFRTVTGRCFASLWLLVSTLAVARAFLYLTDYSMHKRNREMAKWVLKKKITLSDLAAADLDHDGSISKSEFVIYKLKQMGKITEIDILQISKQFDSLDHGMYGKITLADLMGSV* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00426 387 Gene3D - 94 192 - -
Rops9g00426 387 SUPERFAMILY EF-hand 328 384 IPR011992 -
Rops9g00426 387 FunFam Two-pore potassium channel 3 211 325 - -
Rops9g00426 387 Gene3D - 193 330 - -
Rops9g00426 387 Pfam Ion channel 234 305 IPR013099 -
Rops9g00426 387 Pfam Ion channel 113 188 IPR013099 -
Rops9g00426 387 SUPERFAMILY Voltage-gated potassium channels 200 322 - -
Rops9g00426 387 MobiDBLite consensus disorder prediction 14 30 - -
Rops9g00426 387 SUPERFAMILY Voltage-gated potassium channels 101 189 - -
Rops9g00426 387 PRINTS Two pore domain K+ channel signature 266 275 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops9g00426 387 PRINTS Two pore domain K+ channel signature 146 174 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops9g00426 387 ProSitePatterns EF-hand calcium-binding domain. 332 344 IPR018247 -
Rops9g00426 387 FunFam Two-pore potassium channel 2-like 103 199 - -
Rops9g00426 387 MobiDBLite consensus disorder prediction 1 35 - -
Rops9g00426 387 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 135 362 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00426 Rops-Chr9 5888201 5890700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00426 71 384 Ion Channels AT4G18160 50.476 1.04e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00426 K05389 - gmx:100789639 561.992