Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00416 ATGATGTTCCCAATGGTGCTTCTCAGGCTTGCAGACTGGGTTTTGTACCAGCTGCTTGCTAACTCATATTATAGAGCAGCAAGAAAAATGAAAAGTTATGGGCTCCATTTAGGCTATTTGTCTTCCAAACCACCCCATCAACCTTCCTCTTTTCCTAGTATTACCAAATGTGATTTGGAGGGTAGAGGGTCACAAACACTTGCTTGTGACATTCATAGAGTCCTGTTGAGGTCCCACTCTTTCTTTCCTTATTTCATGCTGGTTGCCTTTGAAGGTGGCAGCATTTTTAGAGCACTCCTCTTGCTTTTGTCTTGTCCTGTACTGTGGATTTTAGACCATGAGCTAAGGCTAAAGGTCATGACTTTCATCACCTTTTGTGGGTTAAGAACAAAGAACATGGAAAGTATTTCAAGGGCAGTTTTACCCAAGTTTTATTTGGAGAATCTTAACCTTCAGGCTTATGAGGTTCTTGCTTCAGCAGGGTCTAAAGTTGTCTTCACAAGTGTGCCTAGAGTGATGGTAGAAGGATTTCTCAAGGAGTATTTGAGTGTTGGTACTGTCATAGGTACAGACTTGCACACTGTTGGCTGCTACTATAGTGGTTTGCTCTCTGGCTCTGGCTTACTTGTGAAACATAGAGCCCTCAAAGATTATTTTGGAGATAGAAAACCTGATATTGGGATTGGAAGCTCAAGTGTCCATGATCATCTTTTCATTTCCCTTTGCAAGGAAGCTTATATGGTAAACAATGAAGAGGGCAAGAACGGTCCAAGCTCAGTGTTGCCAAGGGACAAATATCCAAAGCCTTTAATATTTCATGATGGAAGATTAGCTTTCTTGCCTACTCCCTCAGCAACTCTCTTTATGTTCATGTGGCTTCCAATTGGAATTCTTTTAGCCATTTATAGAATTCTTCTTGGTATTTTCCTTCCTTACCAATGGGCCATGATATTAGCAGTTTGGAGTGGTGTAGATCTGCATGTCAAAGGCTGTATCCCTAAAAGATCAGAACCTAACAAAGGGTTCCTCTATGTTTGCAGCCACAGAACTCTCCTGGATCCAGTTTTTCTAAGCACATGTTTAGCAAAGCCTTTGACTGCAGTTACATATAGCTTAAGCAAAGTGTCTGAGTTCATAGCCCCTATTAGGACAGTGAGATTAACAAGGGACAGAAAACAAGATGGTGAAACCATGCAGAAGCTTCTTAGAGAAGGGGATTTAGTGGTGTGTCCTGAAGGAACAACTTGTAGGGAACCATATCTATTAAGGTTCAGTTCACTGTTTGCTGAGTTGGCTAATGAAATTGTGCCTGTGGCTATGAATACTCATGTCAGCATGTTCTATGGGACCACAGCAAGCGGGTTGAAATGCTTGGACCCAATTTTCTTCTTCATGAATCCAAGACCAACCTATCATGTTCAAATTCTTGGGAAGGTACCTAAAGAACTGACATGTGCTGGAGGAAAGTCAAGCTGTGAAGTAGCAAACTATATACAAAAACAATTGGCCGATGCTCTGGGATTTGAGTGCACCACCCTCACTAGGAGAGATAAGTACATGATGCTAGCAGGGAATGAAGGGATTGTTCAAGAGAGAAGTGGAAAAAATGCACTTGATGATATTGAAGTTTAG 1632 0.4154 MMFPMVLLRLADWVLYQLLANSYYRAARKMKSYGLHLGYLSSKPPHQPSSFPSITKCDLEGRGSQTLACDIHRVLLRSHSFFPYFMLVAFEGGSIFRALLLLLSCPVLWILDHELRLKVMTFITFCGLRTKNMESISRAVLPKFYLENLNLQAYEVLASAGSKVVFTSVPRVMVEGFLKEYLSVGTVIGTDLHTVGCYYSGLLSGSGLLVKHRALKDYFGDRKPDIGIGSSSVHDHLFISLCKEAYMVNNEEGKNGPSSVLPRDKYPKPLIFHDGRLAFLPTPSATLFMFMWLPIGILLAIYRILLGIFLPYQWAMILAVWSGVDLHVKGCIPKRSEPNKGFLYVCSHRTLLDPVFLSTCLAKPLTAVTYSLSKVSEFIAPIRTVRLTRDRKQDGETMQKLLREGDLVVCPEGTTCREPYLLRFSSLFAELANEIVPVAMNTHVSMFYGTTASGLKCLDPIFFFMNPRPTYHVQILGKVPKELTCAGGKSSCEVANYIQKQLADALGFECTTLTRRDKYMMLAGNEGIVQERSGKNALDDIEV* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00416 543 CDD LPLAT 323 503 - -
Rops9g00416 543 SMART plsc_2 342 443 IPR002123 GO:0016746
Rops9g00416 543 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 533 - -
Rops9g00416 543 Pfam Acyltransferase 334 435 IPR002123 GO:0016746
Rops9g00416 543 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 265 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00416 Rops-Chr9 5612656 5614719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00416 1 530 Acyl Lipid Metabolism Gene Families AT1G06520 59.386 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00416 K13508 - gmx:100803875 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00416 9 5612656 5614719 Rops9g00416 9 5612656 5614719 ECH
Rops9g00416 9 5612656 5614719 Rops11g02998 11 52777914 52780007 PCT