Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00413 ATGCTGAAAGATCAAAGAAAAAAGAATTCAATGGAGGTGGATTTTTTCTCTGAATATGGTGATGCCAACAAGTACAAAATTCAAGAAATCATTGGGAAAGGGAGTTATGGTGTTGTTTGTTCAGCCATTGACACTCATACTGGTGAAAAGGTTGCAATAAAAAAGATTCGTGATATCTTTGAGCACATATCTGATGCTGCACGAATTCTCCGAGAGATAAAGTTGCTTAGAATTCTTGGACATCCTGATATTGTTGAAATTAAGCATGTTATGCTACCTCCTTCCAGGAGGGACTTCAAAGATATATATGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTACCAGTTACTTCGAGCATTAAAGTATATTCACACCGCAAATGTCTATCATCGAGACTTGAAGCCTAAAAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTTAGTGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCATTTTACTCAAAGTATACTCCTGCTATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCGTCAGTTGGATCTGATTACAGATCTGCTTGGGACTCCCTCACTGGATACTATATCACGGGTACGGAATGATAAGGCAAGGCGATACCTAACTACTATGAGGAAAAAGCAGCCTGTACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTATCACTACGACTACTGGAAAGGTTGCTTGCCTTTGATCCAAAAGACCGGCCTACAGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGGCTTGCAAAAATTGAGAGGGAACCATCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAGGAAGAAATTCGAGAGTTAATTTTCCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACGTAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTATCGATCAATTCAAAAAGCATTTTGCTCATCTTGAGGAAACTGGTGGTAAAAATGATCCAGTTATGCCGCTTGAAAGAAAGCATGCATCACTTCCCAGGTCAACCATTGTACATTCAAATATGGTACCCCCAAAAGAGCAATCAAATATTGCTTCCTGCATAAACCGGCAAACAGCTGAGAAATATAATAATAATTCCAGAGATACAGAAAATCCTGTGCCAAGGTCCATTCAAGGACTGCAAAGAATTCCACTCACAAAACCTGGTAAAGTTGTTGAGCCAATTGTTCAATACAAGTATGGGAGTGTTGTCAAGGATTCATATGATCCCAGGACATTTATCAGAGGCAAAACTTACCCAACGATGTGGAGTCAATACCAAAATAGCATATAA 1536 0.3861 MLKDQRKKNSMEVDFFSEYGDANKYKIQEIIGKGSYGVVCSAIDTHTGEKVAIKKIRDIFEHISDAARILREIKLLRILGHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVRQLDLITDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLSLRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYVNGTERTNFLYPSAIDQFKKHFAHLEETGGKNDPVMPLERKHASLPRSTIVHSNMVPPKEQSNIASCINRQTAEKYNNNSRDTENPVPRSIQGLQRIPLTKPGKVVEPIVQYKYGSVVKDSYDPRTFIRGKTYPTMWSQYQNSI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00413 511 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00413 511 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops9g00413 511 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00413 511 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Rops9g00413 511 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Rops9g00413 511 FunFam Mitogen-activated protein kinase 15 119 - -
Rops9g00413 511 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Rops9g00413 511 FunFam Mitogen-activated protein kinase 111 339 - -
Rops9g00413 511 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Rops9g00413 511 CDD STKc_TDY_MAPK 24 361 - -
Rops9g00413 511 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00413 511 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00413 Rops-Chr9 5574875 5580324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00413 1 445 MAP Kinase Gene Family AT2G42880 84.045 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops9g00413 Pkinase 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00413 - - gmx:100811788 900.582