Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00410 ATGGGGTTTCCATTGATTGGGGAGACCATGCAATTCTTCAATGCACAAAGGAGAAACCAATTGTTTGAAGATTTTGTTCATCCTCGCATTGTTAAACATGGGAAGATCTTCAAAACAAGGATAATGGGGTCTCCAACTGTGGTTGTGAATGGAGCTGAGGCCAATAAGTTTTTATTGTCCAATGAGTTCAAGTTGGTGAAAAGCTCTTGGCCTTCTTCCTCCGTTCAGCTCATGGGAAGTGACTCTATCATGGAGAAAGATGGGGAAAGGCACCGTTTCCTACGTGGTGTTATTGGCACCAGCCTTGGATATGCTGGATTTGAGGTTCTAGTTCCAAAATTGTGCAACAATGTTCAGTTGTATTTAGCTACAAACTGGAAGGGCCAAGAAAAGATTAGTCTTTATCGTTCAACAAAAGTCCTTACATTTAGCATAGTGTTTGAATGCTTGTTGGGGATCAATGTGGAGCCAGGTATGTTAGATACCTTTGAAAGAGTGTTGGAAGGAGTATTTTCTCCAGCAATTGCATTTCCAGGTTCTAAATTTTGGAGAGCAATGAAAGCAAGAAAGGAGATAGAAAATTTGTTGGTCAAAGTGGTGAGAGAGAAGAGAAAGGAAATGGAGGGAAGCTTGCAAAGAGAAGAAGATGGAATGCTGTTATCTAAATTGGTGTCTGGGATGATCCAAGGGGAGATCACTGAAAAAGAGGTCATAGACAATGTGGTGCTGTTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGCTGGCTCAGCATCCTGATTGCTATGGTAAACTTCTTCAAGAACATGTTAATATAATGAGCAATAAAAGATGGGGTGAGAATCTCAATGTAGAAGACATAAAGAAGATGAAGTATACCTGGCAAGTTGCCAGAGAAAGCATGAGACTGTTCCCTCCTATCTTTGGCTCTTTCAGGAAGGCGATTACTGATATTGAATATGAAGGATTCACTATACCTAGAGGATGGAAGGTGCTATGGACAACATATGGCACACATTACAATGAAAAGTATTTTAAGGATCCTATGAATTTCAACCCAAGTAGGTTTGAGGAGGGAATACCCCAATATGTATTTGTTCCATTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTATCAATTAGCTAAGTTAAATATCCTCATCTTTGTGCATTATGTTGTGACCCAATATGAGTGGTTCTTACTCCATCCAGATGAGCCAGTCACAATGGATCCTCTACCCTTCCCTTCCCTTGGAATGCCAATTAGAATTTCTCCCAAGTATACATGA 1311 0.4058 MGFPLIGETMQFFNAQRRNQLFEDFVHPRIVKHGKIFKTRIMGSPTVVVNGAEANKFLLSNEFKLVKSSWPSSSVQLMGSDSIMEKDGERHRFLRGVIGTSLGYAGFEVLVPKLCNNVQLYLATNWKGQEKISLYRSTKVLTFSIVFECLLGINVEPGMLDTFERVLEGVFSPAIAFPGSKFWRAMKARKEIENLLVKVVREKRKEMEGSLQREEDGMLLSKLVSGMIQGEITEKEVIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKLLQEHVNIMSNKRWGENLNVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPRGWKVLWTTYGTHYNEKYFKDPMNFNPSRFEEGIPQYVFVPFGGGPRVCAGYQLAKLNILIFVHYVVTQYEWFLLHPDEPVTMDPLPFPSLGMPIRISPKYT* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00410 436 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Rops9g00410 436 PRINTS E-class P450 group I signature 342 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 PRINTS E-class P450 group I signature 30 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 SUPERFAMILY Cytochrome P450 2 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 Pfam Cytochrome P450 9 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00410 436 CDD CYP90-like 29 433 - -
Rops9g00410 436 FunFam Taxadiene 5-alpha hydroxylase 1 434 - -
Rops9g00410 436 PANTHER CYTOCHROME P450 26 1 419 - -
Rops9g00410 436 Coils Coil 185 205 - -
Rops9g00410 436 Gene3D Cytochrome P450 1 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00410 Rops-Chr9 5530067 5531585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00410 1 339 Cytochrome P450 AT2G42850 66.667 5.39e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00410 - - gmx:100793336 822.002