Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00388 ATGATCTGTACGGTGGTGAACCAACCTGGTACATGGATCAGAGGTTCTGATGTTGTTTTTGGGAAAAGGGGTTCAACCCCAGTTCAGTCATGTTCCCTTGTTTTACCTTCCCACCCAAGAGAAAAAAAAGCTCAGAGATCTTTGGTTTCAGTGCAAAAGCCACTGCACCTTTCTTATGTTGGGAATTTTGTTGGGTCAGTGAGGGATGAACGAAGTGATTTGGTAAAGTGTGGAGCATATGAGGCTGATAGATCAGAGGTTGAAGGAGCTAAGGCACCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACGTGGTGGGCTTTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGTTGAATGCATACCCTTACCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACAAGGATAGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGACTCTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTGGCTGCAACTGTTAGCATGTCAAAAGTTGCAGTATCATTCACACATATTATCAAGAGTGGCGAGCCTGCTTTCAGTGTACTGGTTTCCAGATTTATTTTGGGTGAGACCTTTCCAGTGCCAGTCTATTTGTCTTTGATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACAGAGCTCAATTTCAATATGATTGGTTTTATGGGAGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAGGGGCATGAAGGGAAAGTCTGTTAGCGGAATGAATTACTATGCTTGTTTATCTATGTTGTCCCTGTTAATTCTCACACCGTTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCCCTCTCTCAAATTGGACCCCAGTTTATATGGTGGGTGGCAGCTCAGAGCGTGTTTTATCATCTGTACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCGTTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATCATTATCTTCCACACACCAGTTCAGCCTATCAATGCTCTTGGAGCTGCTATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1182 0.4315 MICTVVNQPGTWIRGSDVVFGKRGSTPVQSCSLVLPSHPREKKAQRSLVSVQKPLHLSYVGNFVGSVRDERSDLVKCGAYEADRSEVEGAKAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00388 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Rops9g00388 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Rops9g00388 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Rops9g00388 393 Coils Coil 388 393 - -
Rops9g00388 393 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00388 Rops-Chr9 5225106 5229306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00388 37 392 Antiporters AT5G54800 82.645 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00388 K15283 - gmx:100801832 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01017 11 14732829 14735803 Rops9g00388 9 5225106 5229306 ECH
Rops9g00388 9 5225106 5229306 Rops9g00388 9 5225106 5229306 ECH
Rops11g02923 11 51101734 51106116 Rops9g00388 9 5225106 5229306 PCT