Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00382 ATGAACTTCTTTTCATGTTGTTCGTCACAACAAAAGATCAACAAAAACTCATTCAGGAAGGGCATTAAGGACTACCATGAATCAAAAACTCTACCATCATTTACCAACATGTGTTTTAAAACTGATGGCAGCAAGAGGAAGTACATAGAACAAGAAATAGCAAAAATTGGAAAAGGAAATAACACCTCTCGGGTTTTTTCGTATCACGAGCTATGTGTTGCAACTCATAACTTTCACCCTGGCAATATGGTTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACGCATTAAAAGCATAAATCAGGTTGTTGCTGTTAAGAAACTTGACAGGAATGGATTCCAAGGAAGCAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGTTAGGGTATTGTGCTGATGGTGATCAAAGGATTTTGGTATATGAGTACATGGCGAATGGTTCTTTAGAAGATCACCTTCTTGAACTATCTCGGGACAGAAAGCCTTTGGACTGGCATACCAGAATGATAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTACATGAAGTTGCAAATCCACCAGTGATATATCGTGATTTCAAAGCATCAAACATACTATTAGATGAAAACTTCAATCCAAAACTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATCAATCACATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCTCCTGAATATGCCTCAACAGGTCAATTGACTAAGAAATCAGATGTATACAGTTTTGGAGTAGTGCTTTTAGAGATGATCACAGGAAGAAGAGTACTTGATTCTTCAAGACCATCTGGAGAGCAAAACTTAGTCACTTGGGCAAAACCACTATTCAAAGATAGAAGGAAATGTACATTAATGGCTGATCCATTACTAGAAGGGAACTACCCAATAAAGGGTCTATACCAAGCACTAACAGTTGCAGCAATGTGTCTTCAGGATAAAGCTGATAGTCGACCTTTGATTAGTGATGTAGTTACTGCTCTTGGCGTTTTAGCAAAGAAGCATGTATGA 1083 0.3906 MNFFSCCSSQQKINKNSFRKGIKDYHESKTLPSFTNMCFKTDGSKRKYIEQEIAKIGKGNNTSRVFSYHELCVATHNFHPGNMVGEGGFGRVYKGRIKSINQVVAVKKLDRNGFQGSREFLVEVLILSLLHHPNLVNLLGYCADGDQRILVYEYMANGSLEDHLLELSRDRKPLDWHTRMIIAEGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDQSHVSTRVMGTYGYCAPEYASTGQLTKKSDVYSFGVVLLEMITGRRVLDSSRPSGEQNLVTWAKPLFKDRRKCTLMADPLLEGNYPIKGLYQALTVAAMCLQDKADSRPLISDVVTALGVLAKKHV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00382 360 Gene3D Transferase(Phosphotransferase) domain 1 155 360 - -
Rops9g00382 360 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Rops9g00382 360 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Rops9g00382 360 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Rops9g00382 360 Pfam Protein kinase domain 80 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00382 360 CDD STKc_IRAK 84 352 - -
Rops9g00382 360 ProSiteProfiles Protein kinase domain profile. 78 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00382 360 FunFam Serine/threonine-protein kinase PBS1 155 360 - -
Rops9g00382 360 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Rops9g00382 360 PANTHER OS07G0668900 PROTEIN 21 358 - -
Rops9g00382 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00382 Rops-Chr9 5164939 5168354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00382 1 355 Glycoside Hydrolase AT3G07070 61.050 5.57e-155 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops9g00382 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00382 - - gmx:100798032 629.787