Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00379 ATGAGTGTTATCCTTGTGAGTTTCCTCTTACTAATCCCAATTCTCCTTCTGCTTAGAAAAACAAGAAAACCATCCAAAAGGGTCCCTCCTGGTTCACTTGGAATACCAATTATTGGTCAAAGCCTTGGCCTTCTTTGGACTATGCGTGCCAACACTGCTGAAAAATGGGTTGAACAAAGAATCAACAAGTATGGTCCTATTTCAAAGCTAAGCCTCTTTGGAAAACCAACAGTTTTCATCTATGGACAGGCTGCTAATAAGTTTATATTCCACAATGGTGGTGACACAATTGCCAACCAGCAAACACAGTCCATCAAAATGATCTTAGGTGACAGGAACTTGCTGGAACTGGGTGGCAAAGATCACAGCCGAGTCAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCCTTGAAGCGATATGTAGGAAAAATGGATGAAGAAGTTAGAAGGCATCTTGAGATGCATTGGCAAGGGAAACAGCAGGTCAAGGTATTGCCCCTGATGAAGACACTCACATTCAACATAATTTGCTCTCTTCTTTTTGGCCTTGAGAGTGGAAAACAAAGAGATCAATTCCTCAGTTCCTTCCAAGCTATGATTGAAGGAATGTGGTCAATCCCACTTAACGTGCCCTTCACACGCTACAACCGCAGCCTCAAAGCAAGTGCAAGGATACAGAACATGCTGAAGGAGATTGTGCACAAGAAGAAGATTGAACTCGAGCAAAATGGAGCCTCTCCCCGCCAAGACTTAATCAGTTGTTTGCTTGGCATGATTGGTGAAGATGACAAACAAGTTATGACTGAGAAGGAAATCATTCATAATGCTATGCTTGTCATGGTTGCTGGACATGACACTTCATCTGTTCTAATCACTTTCATTATCCGACTCTTGGCTAATGAACCTTCTATTTGTGCAGCAGTTCTTCAAGAACAGGAGGACATAGCAAAAAGCAAGCCCTCAGGAGAGCCGTTGACATGGGAAGACCTTTCAAAGATGAAATACACATGGAGAGTAGCAATGGAAACTCTTAGGATGTTTCCTCCCATCTTTGGTGGCTTCAGAAAGACTGTGACAGATATTGAATATGGTGGATACCTAATACCCAAAGGGTGGCAGATCTTCTGGGTTACAGCAATGACCCACATGGACAACAGCATTTTCCCAGAACCATCAAAATTTGATCCAAGTAGATTTGAAAACCAAGCATCTATTCCACCCAATTGCTTCATACCATTTGGAGGGGGAACAAGAATATGTCCAGGAAATGAGTTTGCCAGGGTTGAAACTTTGGTGGCAATTCATTACCTTGTGACCCGGTTTGGTTGGAAGCTATGTTCAGACAATTTCTTCATTAGGGATCCAATGCCAGTACCCACTCAAGGGCTACTAGTTGAAATTTGGCCAAGGAAACTCTCTTAG 1425 0.4281 MSVILVSFLLLIPILLLLRKTRKPSKRVPPGSLGIPIIGQSLGLLWTMRANTAEKWVEQRINKYGPISKLSLFGKPTVFIYGQAANKFIFHNGGDTIANQQTQSIKMILGDRNLLELGGKDHSRVRGALVSFLKPESLKRYVGKMDEEVRRHLEMHWQGKQQVKVLPLMKTLTFNIICSLLFGLESGKQRDQFLSSFQAMIEGMWSIPLNVPFTRYNRSLKASARIQNMLKEIVHKKKIELEQNGASPRQDLISCLLGMIGEDDKQVMTEKEIIHNAMLVMVAGHDTSSVLITFIIRLLANEPSICAAVLQEQEDIAKSKPSGEPLTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKTVTDIEYGGYLIPKGWQIFWVTAMTHMDNSIFPEPSKFDPSRFENQASIPPNCFIPFGGGTRICPGNEFARVETLVAIHYLVTRFGWKLCSDNFFIRDPMPVPTQGLLVEIWPRKLS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00379 474 CDD CYP90-like 60 470 - -
Rops9g00379 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Rops9g00379 474 Gene3D Cytochrome P450 18 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 Pfam Cytochrome P450 29 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PANTHER CYTOCHROME P450 26 26 459 - -
Rops9g00379 474 SUPERFAMILY Cytochrome P450 24 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00379 474 FunFam Taxadiene 5-alpha hydroxylase 19 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00379 Rops-Chr9 5137872 5140576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00379 8 442 Cytochrome P450 AT5G45340 32.414 1.61e-75 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00379 - - gmx:100790001 817.379