Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00370 ATGTTTAGGTACTCAATGGTAAAAGTGAGAAAGCAATTTGCTATAGTTAGCAGAGGTGACTTGGAGGATGAAGAAGAGGAAACGAAAGAGCTCCAATACCCAAGGATTTCGTATAGACAATTTAGAGAAGCCACTGGAGGCTTCAGTGCTTCAAGCCTAATTGGTTCAGGCCAGTTTGGACAGGTCTACAAAGGAGTACTCCAAGATAATACAAGAGTAGCAGTGAAGGTATTAGATACAACAACAACAACAGCTGGTGAGATTTCAAGGAGCTTTAGAAGGGAATGTCAAATCCAGAAAAAGATCAGGCACAGAAATTTAATAAGGATCATCACAATTTGCAGCAAGCCAGGGTTTAAATCTCTTGTTCTTCCACTGATGCTAAATGGTAGCCTTGAGAGGCATCTATATCCAAGCCATGAGTTAAGCCAGAGGTTGGATGTGGTTCAGTTAGTGAGAATATGCAGTGATGTGGCTGAGGGAATGTCCTATCTGCACCATTACTCTCCTGTGAAAGTAGTGCATTGTGATTCTGTTTACACTATGCAGGACCATGCCATCCTGAGAGCCTTATATGAAAACAATGGATCAAACTTGACCAATGGTTTCAAGACAGAGAGGGAGATGGTCAGTGTCTCACAGGAAACAGATCTGACAACTGATATGAATGTTGAAAACTCTTCAGTGGTATCAAATTTTGATATGGGTAGGGTGCCCTTTGAGAATCAAGATCATCCACACATACATTGCGAGGGGACCTTCATGGTTTGTGGATTACTAAATTCAAACAAAGGACCATTTAGGAAGAAAAAAAATGTTGTTTTGGAGCTAAAAAGAAGAGGAGTAAAATCAACTTTGAACTAG 864 0.4051 MFRYSMVKVRKQFAIVSRGDLEDEEEETKELQYPRISYRQFREATGGFSASSLIGSGQFGQVYKGVLQDNTRVAVKVLDTTTTTAGEISRSFRRECQIQKKIRHRNLIRIITICSKPGFKSLVLPLMLNGSLERHLYPSHELSQRLDVVQLVRICSDVAEGMSYLHHYSPVKVVHCDSVYTMQDHAILRALYENNGSNLTNGFKTEREMVSVSQETDLTTDMNVENSSVVSNFDMGRVPFENQDHPHIHCEGTFMVCGLLNSNKGPFRKKKNVVLELKRRGVKSTLN* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00370 287 Gene3D Phosphorylase Kinase; domain 1 19 125 - -
Rops9g00370 287 SUPERFAMILY Protein kinase-like (PK-like) 28 177 IPR011009 -
Rops9g00370 287 Pfam Protein tyrosine and serine/threonine kinase 51 175 IPR001245 GO:0004672|GO:0006468
Rops9g00370 287 ProSiteProfiles Protein kinase domain profile. 48 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00370 287 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 177 - -
Rops9g00370 287 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Rops9g00370 287 Gene3D Transferase(Phosphotransferase) domain 1 127 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00370 Rops-Chr9 4843505 4844368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00370 33 177 Receptor kinase-like Gene Family AT3G47110 41.026 2.39e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops9g00370 PK_Tyr_Ser-Thr 4.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00370 - - tpra:123909601 267.7