Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00354 ATGAGTGTAGTGGGGTTTGACATTGGAAATGAGAACTGTGTCATTGCTGTAGTGAAGCAACGTGGGGTTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTTTGCTTTGGAGAGAAGCAAAGGTTTTTAGGGTCAGTTGGTGCTTCTTCTGCTATGATGCACCCTAAGTCCACTATATCTCAAGTGAAGAGACTAATAGGTAGGAGATTTGCAGACCCTGATGTTCAAAATGACCTGAAAAAGATGCCTTTTGAAATTTCTGAAGGCCCAGATGGTGGCATTCTGTTTCACGTGCAGTACTTGAAGAAGACTCATACATTTACACCGGTTCAAATAGTAGCAATGCTCTTTGCTCACTTGAAGTCCATAGCCGAAAAAGATTTGGGCAGCTCTGTTTCGGATTGTGTTATTGGAGTTCCATCATACTTTACTGACTTGCAGAGACGGGCATATCTCAATGCAGCAACAATTGTTGGGTTGAAGCCTTTGAGGTTGATCCATGATTGCACTGCAATTGGTCTTGGTTATGGAGTTTACAAAACAGATTTTCCCCATGCAGCTCCTATCTATGTTGCGTTTATTGACATAGGTCACTGTGACACTCAGGTCTCTATTGCAGAATTTCAGGCGGGGCAAATGAAGATACTTTCACATGCTTTTGACAGCAGCTTAGGGGGGAGAGACTTTGATGAGGTTCTATTTAGTCATTTTGCAGCAAAATTTAAGGAACAGTACAACATTGATGTGTATTCTAATGCCAGGGCATGTAATAGGCTGCGTGCAGCATGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATCATGAGGCACCTCTGAACATTGAGTGTTTGATGGATGAAAAAGATGTTAATGGATTTATCAAGAGGGAAGAATTCGAGAATCTGGCATCAGGATTATTTGAGAGAATTTATGTTCCTTGCAACAAAGCATTGGCTGACGCAGGCTTGACTGTACAAAAGCTTCATTCTGTTGAGTTAGTTGGTTCAGGTTCAAGGATTCCAGCTATAACTAGATTATTGACTTCTCTCTTTAAGAAAGAACCTGGCCGAACATTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTTCAGTGTGCATTGCTCAGTCCTGTTCTCCGTGCCAGAGAATACGAGGTCCTGGATTCTACACCTTTTTCCATTGGGCTTTCATCAGATGAAGGTCTAATTTGTGCAGGATCAAATGGTGTACTTTTCCCCAAAGGCCAACCCCTTCCAAGTGCTAAAACTCTAACATTAGAGTGCAGTAATTTACTCCATTTGGAAGCATTCTATGCTAATCCAGATGAAGTACCACATGGGACATCTCCTAAAATTAGTTGCTTCACAATTGGTCCTTTCCATGGATCCCATGGAAGTAAGACAAGAGTTAAAGTTAAAGTTCAACTAAATTTGCATGGCATTGTCGGTATTGAATCAGCTACATTCATCGCGGATTATGTAGATGATTCAGTTACAGCAGGTGATCATCATTTGAATTCTGAAGCGATGGATGTTGAACATGTTTCTGAGACAGTTGAAAATGTCACTGAAGATGGTATCAATAACAAGTGTGAATCTCCACATCATTCTGCTGATGATACAAGAAAAGATAAAGCTAACATAGGGCTTCATTTACCAGTCAGTGAGAATATCTATGGTGGAATGACCAAGGCTGAGATCCTGGAAGCTCAAGAAAAAGAACTCCAGTTAACAGAGCAGGATAGAACAATGGAGCTAACCAAAGACAAGAGGAATTCCTTGGAGTCTTATGTCTATGAAATGAGGAGTAAGCTCTTCAACACATATCGGAACTTTGCAAGTGAACAAGAGAGGGATGGCATATCTAGGAGCCTGCAAGAGACTGAGGATTGGCTTTATGATGATGGTGATGATGAAACCGTACATGCTTATTCTGCAAAATTAGAAGCTCTAAAACAGCTGGTGGATCCAATTGAGAATCGGTATAAAGATGAAGAAGCAAGACCACAAGCTACCAGAGATTTGTTAAGTTGCATTGTAGAGCATCGAATGTCTACAGATTCCCTTTCACCCGAAAATAAAGAACTGATCATCAATGAGTGCAGTAAAGCAGAACAGTGGCTAAGAGAGAAGATGCAGCAACAAGATACTTTGCCCAAAAGCTCTGATCCGGTAATTTGGTCAAGTGATATCAAGAGCAAGGCAGAGGATTTAAACTTAGTATGCCAACGGATATTGAGATCCAAGGATTCTCCAATTCCAGAAGACAATGGTGAAGACAAGCAGAATACTTCTAATCATCAATGA 2322 0.41 MSVVGFDIGNENCVIAVVKQRGVDVLLNDESKRETPAVVCFGEKQRFLGSVGASSAMMHPKSTISQVKRLIGRRFADPDVQNDLKKMPFEISEGPDGGILFHVQYLKKTHTFTPVQIVAMLFAHLKSIAEKDLGSSVSDCVIGVPSYFTDLQRRAYLNAATIVGLKPLRLIHDCTAIGLGYGVYKTDFPHAAPIYVAFIDIGHCDTQVSIAEFQAGQMKILSHAFDSSLGGRDFDEVLFSHFAAKFKEQYNIDVYSNARACNRLRAACEKLKKVLSANHEAPLNIECLMDEKDVNGFIKREEFENLASGLFERIYVPCNKALADAGLTVQKLHSVELVGSGSRIPAITRLLTSLFKKEPGRTLNASECVARGCALQCALLSPVLRAREYEVLDSTPFSIGLSSDEGLICAGSNGVLFPKGQPLPSAKTLTLECSNLLHLEAFYANPDEVPHGTSPKISCFTIGPFHGSHGSKTRVKVKVQLNLHGIVGIESATFIADYVDDSVTAGDHHLNSEAMDVEHVSETVENVTEDGINNKCESPHHSADDTRKDKANIGLHLPVSENIYGGMTKAEILEAQEKELQLTEQDRTMELTKDKRNSLESYVYEMRSKLFNTYRNFASEQERDGISRSLQETEDWLYDDGDDETVHAYSAKLEALKQLVDPIENRYKDEEARPQATRDLLSCIVEHRMSTDSLSPENKELIINECSKAEQWLREKMQQQDTLPKSSDPVIWSSDIKSKAEDLNLVCQRILRSKDSPIPEDNGEDKQNTSNHQ* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00354 773 Gene3D - 186 360 - -
Rops9g00354 773 PANTHER HSC70CB, ISOFORM G-RELATED 1 767 - -
Rops9g00354 773 Coils Coil 653 673 - -
Rops9g00354 773 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 554 IPR029047 -
Rops9g00354 773 MobiDBLite consensus disorder prediction 751 773 - -
Rops9g00354 773 Pfam Hsp70 protein 3 667 IPR013126 GO:0005524|GO:0140662
Rops9g00354 773 PRINTS 70kDa heat shock protein signature 140 160 - -
Rops9g00354 773 PRINTS 70kDa heat shock protein signature 2 15 - -
Rops9g00354 773 PRINTS 70kDa heat shock protein signature 363 383 - -
Rops9g00354 773 PRINTS 70kDa heat shock protein signature 332 348 - -
Rops9g00354 773 PRINTS 70kDa heat shock protein signature 30 42 - -
Rops9g00354 773 PRINTS 70kDa heat shock protein signature 388 407 - -
Rops9g00354 773 MobiDBLite consensus disorder prediction 754 773 - -
Rops9g00354 773 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 667 IPR029048 -
Rops9g00354 773 Gene3D Actin; Chain A, domain 4 230 313 - -
Rops9g00354 773 FunFam Heat shock 70 kDa protein 4 1 82 - -
Rops9g00354 773 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Rops9g00354 773 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Rops9g00354 773 Gene3D - 5 374 - -
Rops9g00354 773 FunFam Heat shock 70 kDa protein 4 105 194 - -
Rops9g00354 773 FunFam Heat shock 70 kDa protein 4 230 313 - -
Rops9g00354 773 Gene3D - 567 679 IPR029048 -
Rops9g00354 773 CDD HSPA4_like_NDB 2 381 - -
Rops9g00354 773 Gene3D - 38 113 - -
Rops9g00354 773 FunFam Heat shock 70 kDa protein 4 567 677 - -
Rops9g00354 773 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 600 IPR029047 -
Rops9g00354 773 FunFam Heat shock 70 kDa protein 4 38 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00354 Rops-Chr9 4348435 4354469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00354 4 427 Calmodulin-binding Proteins AT1G16030 34.895 3.49e-82 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00354 K09489 - gmx:100795914 1243.02