Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g00345 | ATGCCTATTGCAAACTCTTCTCCAACTACGACCAAGTGGTTTTCAGGAATGTTAGAAGCAGTAACAAGGTGCAAGGAAGTTTTTTCTTTGTGGATGCTTGCAGTCATTGGAAGTTCTGTAGTTGGGCTATTCAAGAAAGCTATGGAGGGAGTTCTCTTTGCTGCACTTACCTGCATTCTGGTACTAGGAGGGTCAATAGTAGGAACAATTGCAGGAGCCATCAAAGGCCAGACTACAGAATATGGTTTTCTTGATGGGGCTGGGAAAGGAGCAATCACAGGAGCCATTGCAGCCATAGAATTGACAAATTTTGTTGCTTTTGATGAGTCATTGACCAAGGTTGCCCTGTTGAGCAGTTTATTAAATGGGAAAGTCTTTATGGAATGGATTTGTCCAGTTGTTGCACAAGCCTACCAGTTGCATATCAACACATCAGAAACAACTTATGGAGGGGCCTCAGATATTTATGATATCAAGGGAGTGAAAGGGATGCGCCAGAATTTTATTCTGAAGCTTCCTTTTCACCAATTCAACTCCAACAAAATGATGAAATCATATAATAAGTCATGCTGCTCAATTTGCTTTCAGGATTTTGAGGATAAAGAATGGGTTAGAATGCTTCCAAAATGTTGCCACCTTTTTCATTTAGAGTGCATAGACAAGTGGCTACTCCAACAAGGGTCATGCCCCATGTGTAGAACTTATGTTAATGACCACATTTTTGAATAG | 729 | 0.4074 | MPIANSSPTTTKWFSGMLEAVTRCKEVFSLWMLAVIGSSVVGLFKKAMEGVLFAALTCILVLGGSIVGTIAGAIKGQTTEYGFLDGAGKGAITGAIAAIELTNFVAFDESLTKVALLSSLLNGKVFMEWICPVVAQAYQLHINTSETTYGGASDIYDIKGVKGMRQNFILKLPFHQFNSNKMMKSYNKSCCSICFQDFEDKEWVRMLPKCCHLFHLECIDKWLLQQGSCPMCRTYVNDHIFE* | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g00345 | 242 | ProSiteProfiles | Zinc finger RING-type profile. | 191 | 233 | IPR001841 | - | |
Rops9g00345 | 242 | Pfam | Ring finger domain | 191 | 233 | IPR001841 | - | |
Rops9g00345 | 242 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 42 | 234 | IPR044523 | - | |
Rops9g00345 | 242 | SUPERFAMILY | RING/U-box | 184 | 237 | - | - | |
Rops9g00345 | 242 | CDD | RING-H2_EL5-like | 190 | 233 | - | - | |
Rops9g00345 | 242 | SMART | ring_2 | 191 | 232 | IPR001841 | - | |
Rops9g00345 | 242 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 155 | 238 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g00345 | Rops-Chr9 | 4242732 | 4244336 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g00345 | 46 | 236 | C3H Transcription Factor Family | AT5G66070 | 36.816 | 1.46e-37 | 129 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g00345 | - | K19041 | gmx:100305612 | 320.087 |