Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00325 ATGACAATGGGGTTAAAGAATTTGAGGGCAAAGAAGAAAGGATCCTCAATGAGGAAAAAGAATTTGAGTACACAGAATAAAGGATCCTCAATGGGGAAAAAGAATTTGAGTGTTAAGAAGGAAGGAGTTGGGAAAGTAAAGATGGGATATGTTTGTGATTTGGCTTTGGAAATATTTACAGTTGCTGCCCGTGACTTCCTTGCCAAGGAAGCACCACAGCTGCTATCCGAGGATAGTTCTGTTCTCTCAAACCATTCCCAGGAAGGTACCTCTATTAGTTTTCTTGATTCAGAGAATGAACCTGTTTCTGAGTGCAGTAGGGGATCTAAGAAGAACGTGAAAAGAAAGGGCAAGAAAAAAGGGACTAAACCATCAAAGAAGCGCAAGAGAAACAATAATGGTGAGAACAATAATCCTGTTATCCAAGCTGAATTGCCGAGGGCATTTCAAGAAAAGATTCAAGAATTGGAGGGTAGTGAGGTGAAGTTGGTGATCCAGAAGGAAATCACCAAGACTGATTTGGAGCCAAACAATGGCAGATTCTCCATCCCAGTTAGAAAGATTCAACGTGACGCCATGAATCTTCTGACAGAATCAGAGGATTCCTCCTTAGAAGAGCGTGAAGGGAAAAAGCAAACGTTTGTTGGTTTGCCCGTGTTTGTGTTGGATCCTGATCTTAAAGACTACAACATGCGCTTGAAGAGGTGGGAAATGAACGACAACCTTGTCTACAATCTAACCACCGGATGGAATGACGTGGTGCGCAATAATAATCTTAAAGTCAAAGATATGGTGCAATTGTGGTCTTTCAGAAGATGCAATCAACTGTGTTTTGCACTAGTCAAGCTTTAA 852 0.4131 MTMGLKNLRAKKKGSSMRKKNLSTQNKGSSMGKKNLSVKKEGVGKVKMGYVCDLALEIFTVAARDFLAKEAPQLLSEDSSVLSNHSQEGTSISFLDSENEPVSECSRGSKKNVKRKGKKKGTKPSKKRKRNNNGENNNPVIQAELPRAFQEKIQELEGSEVKLVIQKEITKTDLEPNNGRFSIPVRKIQRDAMNLLTESEDSSLEEREGKKQTFVGLPVFVLDPDLKDYNMRLKRWEMNDNLVYNLTTGWNDVVRNNNLKVKDMVQLWSFRRCNQLCFALVKL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00325 283 CDD B3_DNA 165 278 IPR003340 GO:0003677
Rops9g00325 283 MobiDBLite consensus disorder prediction 111 127 - -
Rops9g00325 283 Gene3D - 147 283 IPR015300 -
Rops9g00325 283 MobiDBLite consensus disorder prediction 19 33 - -
Rops9g00325 283 MobiDBLite consensus disorder prediction 92 142 - -
Rops9g00325 283 Pfam B3 domain-containing protein At2g31720-like 151 255 IPR005508 GO:0003677
Rops9g00325 283 ProSiteProfiles B3 DNA-binding domain profile. 226 283 IPR003340 GO:0003677
Rops9g00325 283 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 42 283 IPR005508 GO:0003677
Rops9g00325 283 MobiDBLite consensus disorder prediction 1 35 - -
Rops9g00325 283 SUPERFAMILY DNA-binding pseudobarrel domain 164 280 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00325 Rops-Chr9 4045709 4046560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00325 137 280 B3 DNA Binding Superfamily AT1G05930 30.464 7.13e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00325 - - gmx:102667627 159.844