Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00315 ATGAAACCCAACAGTGATTATAAAACCGAACGCATTCGATACATGGCGATTTTGCCCCAATCTCTCTCTATAAACGGCGCGTCGTTTGGAGTTCCCGCCGCACAATCGAACAACGCCGCGAACATGGATCGCAAGATGGCGTCCGCCGATCACCTTGTTCTCGAACTGAGCAATCCCGATCTCCGTGAAAACGCTCTTCTTGAACTCTCCAAGAAGAGAGAGTTTTTTCAGAATCTTGCTCCATTATTGTGGAATTCTTTCGGTACTATGGCAGCACTTTTACAGGAAATAGTCTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCAGCTCAATCAAATCGAGTATGCAATGCTCTTGCTCTGCTTCAGTGTGTGGCATGTCACCCTGATACAAGGATGCTATTCCTCAATGCTCACATGCCTCTGTATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTATTTGAGACTCACCAGTCTTGGTGTCATTGGTGCTTTGGTGAAGGTTGATGACACAGAAGTTATAGGTTTCCTTCTTTCAACAGAGATAATTCCACTGTGCCTGCGCACTATGGAAATCGGCAGTGAATTGTCAAAAACTGTTGCAACATTTATAGTTCAAAAAATTCTGTTGGACGATGTTGGTTTGGAATATGTTTGTGCTACAGCAGAGCGCTTTTTTGCAGTAGGTCGAGTTTTGGGGACCATGGCGGCCAGCCTTGTTGAGCAACCTTCACCTCGTCTTTTGAAGCATATTGTTCGATGTTATCTTCGTCTGTCTGATAATCAAAGCAGGGCTTGCGATGCATTAAGAAGCTGTCTTCCTGACGTGTTAAGAGATGGCACTTTCAGTAGTTGCATTCTTGAAGACCTAACAACTAGGAGATGGATGCAGCAGTTGCTTCACAATGTTGGAGCGAATCGGGTTCCTTCACCTCAAGCTGTTGGTGGATTCGATCATATGATGGTGTCGTGA 996 0.4458 MKPNSDYKTERIRYMAILPQSLSINGASFGVPAAQSNNAANMDRKMASADHLVLELSNPDLRENALLELSKKREFFQNLAPLLWNSFGTMAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVACHPDTRMLFLNAHMPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVIGFLLSTEIIPLCLRTMEIGSELSKTVATFIVQKILLDDVGLEYVCATAERFFAVGRVLGTMAASLVEQPSPRLLKHIVRCYLRLSDNQSRACDALRSCLPDVLRDGTFSSCILEDLTTRRWMQQLLHNVGANRVPSPQAVGGFDHMMVS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00315 331 SUPERFAMILY ARM repeat 58 276 IPR016024 -
Rops9g00315 331 FunFam Cell differentiation protein RCD1 43 314 - -
Rops9g00315 331 Gene3D - 41 312 IPR011989 -
Rops9g00315 331 Pfam Cell differentiation family, Rcd1-like 52 311 - -
Rops9g00315 331 PANTHER UNCHARACTERIZED 41 314 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00315 Rops-Chr9 3976562 3989342 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Rops9g00315 Rcd1 2e-124 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00315 K12606 - pop:7483613 529.635